DRSC/TRiP Functional Genomics Resources

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Protein Alignment hb and CG12391

DIOPT Version :9

Sequence 1:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_610639.1 Gene:CG12391 / 36170 FlyBaseID:FBgn0033581 Length:587 Species:Drosophila melanogaster


Alignment Length:309 Identity:65/309 - (21%)
Similarity:106/309 - (34%) Gaps:93/309 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   518 NQQQSDNEEEEQ---------DDEYERKSVDSAMDLSQGTPVKE-------DEQQQQ---PQQPL 563
            ::.:..|||.|:         |.|.|..:.|...||:. .|::|       ||.|.:   .::.|
  Fly   187 DEDEDPNEEVEEIEPDFETGTDAEGELITGDEPGDLAD-VPIRERKKEEPVDEDQCRVCTSKEEL 250

  Fly   564 AMNLKVEEEATP----LMSSSNASRRKGRVLKLDTL---------------LQLRSEAMTSPEQL 609
            ....|.:.:|||    |:...|.|     :|..|.:               :|||.:..|:.::|
  Fly   251 VCLFKKQIDATPADMLLVICPNVS-----ILPKDFMPQFICTKCMGSLTIAIQLRKQLETTDQEL 310

  Fly   610 K-----------------VPSTPMPTASSPIAGRKPMPEEHCSGTSSADESMETAHVPQANTSAS 657
            :                 |...|:..:|              ......|:..:.:.| ...|||.
  Fly   311 RKRLSRSKNKVRRPRGYVVIDAPVTDSS--------------EDEDELDDEFKVSDV-AGTTSAD 360

  Fly   658 STASSSGNSSNASS--NSNGNSSSNSSSNGTTSAVAAPPSGT------PAAAGAI--YECKYCDI 712
            |.::.|.:|.....  ...|.........||.|  ...||..      |::..::  :||..||:
  Fly   361 SDSADSDDSEKEKKKPGPRGRPRKKPLKRGTDS--DGEPSSAQKKKYQPSSTASVGPFECPNCDL 423

  Fly   713 FFKDAVLYTIHMGYHSCDDVFKCNMCGEKCDGPVGLFVHMARN----AH 757
            .|.....|.:|...|...: ..|.:||:|.........||.|:    ||
  Fly   424 TFSRKQSYVLHRKTHERIE-HACPICGKKFKVEWAYKTHMQRHEQERAH 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368
C2H2 Zn finger 271..291 CDD:275368
zf-H2C2_2 283..308 CDD:290200
C2H2 Zn finger 299..319 CDD:275368
C2H2 Zn finger 327..345 CDD:275368
C2H2 Zn finger 707..727 CDD:275371 6/19 (32%)
C2H2 Zn finger 735..757 CDD:275371 7/25 (28%)
CG12391NP_610639.1 zf-AD 240..313 CDD:285071 16/77 (21%)
zf-C2H2 416..438 CDD:278523 7/21 (33%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
zf-C2H2 443..465 CDD:278523 6/21 (29%)
C2H2 Zn finger 445..465 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..491 CDD:275368
C2H2 Zn finger 504..521 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464958
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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