DRSC/TRiP Functional Genomics Resources

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Protein Alignment hb and Zfp518a

DIOPT Version :10

Sequence 1:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001025209.1 Gene:Zfp518a / 309478 RGDID:1305314 Length:1478 Species:Rattus norvegicus


Alignment Length:736 Identity:145/736 - (19%)
Similarity:221/736 - (30%) Gaps:214/736 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 LPNP--MQH---FYGGNLRPSPQPTPTSASTIAPVAVATGSSEKLQALTPPMDVTPPKSPAKSSQ 194
            :||.  |:|   .|....:..||....|.| :..|:.|.|.:::.:  :...:....|..||.  
  Rat    59 IPNEILMKHEVEKYRKLFQSKPQTARKSVS-VRTVSCAKGCAQRCE--SERAEDEAGKMCAKI-- 118

  Fly   195 SNIEPEKEHDQMSNSSEDMKYMAESEDDDTNIRMPIYNSHGKMKNYKCKTCGVVAITKVDFWAHT 259
            .|....|..|:...|..|::...|..            .||::.::.|:.|...|.....|..|.
  Rat   119 LNFTCSKCQDRTQYSPNDLQKHFEMW------------HHGELPSFPCEMCSFSASDFQIFKQHR 171

  Fly   260 RTH----MKPDKI------------------------LQCPKCPFVTEFKHHLEYHIRKHKNQKP 296
            :||    :|.|..                        .||.:|.|.|:.......||.:|| :..
  Rat   172 KTHRNTFVKCDICNSERSYTLLDLTKHFTSKHCVNGNFQCEECRFFTQDVGTFVQHIHRHK-EVH 235

  Fly   297 FQCDKCSYTCVNKSMLNSHRKSHSSVYQYRCADCDY----------------------------- 332
            ::|.||.:.|..|..|..|.:.||....:.|..|.|                             
  Rat   236 YKCGKCHHLCFTKGELQKHLRVHSGTLPFTCHYCSYGAIHKDQLVRHVITLHKEHLYAKEKLERD 300

  Fly   333 -----ATKYCHSFKLHLRKYGHKPGMVL----------DEDGTPNPSL--VIDVYGTRRGPKS-- 378
                 ..|.....||.|::|...|....          ||....|...  ::....|:...:|  
  Rat   301 QYDKRVAKTTTGLKLILKRYKIGPTKTFWKRKTIASGNDESIGKNAQAFNIVSKTQTKSEDQSQE 365

  Fly   379 ----KNGG---------PIASGG------SGSGSRKSNVAAVAPQQQQSQPAQPVA--------- 415
                :.||         ||.||.      |.....|::..|.||....|....|..         
  Rat   366 QLNEEKGGRQHCEDGDKPIESGSEKATVLSTGQCNKADEGASAPSSVLSAVQGPTVLLVRNNKIT 430

  Fly   416 -TSQLSAALQGFPLVQGN-----SAPPAASPVLPLPASPAKSVASVEQTPSLPSPAN-------- 466
             .:..||...||.:|.|.     ...||...:||.||....:  ..|.|.:||..|.        
  Rat   431 IPANYSAKFMGFKMVDGRQHIVIKLLPANKQILPSPALQPNT--EKESTANLPPQAMDNTGFATG 493

  Fly   467 -----------------LLPPLASLLQQNRNMAFFPYWNLNLQMLAAQQQAAVLAQLSPRMREQL 514
                             ..|.|...:...:..||....|..|||:...:....|...|..:....
  Rat   494 LTAMNDTDFVKAAPLSCSSPELPRKVISEKETAFISEKNNMLQMVDDSKSVTSLPTPSESVTSVR 558

  Fly   515 QQQNQQQSDNEEEEQDDEYERKSVDSAMDLSQGTPVKEDEQQQQPQQPLAMNLKVEEEATPLMSS 579
            .....:..||.     |.:|..|..|..||. ||.:         ..|..:||.:...|......
  Rat   559 LTTKVEARDNV-----DLWENPSTQSHPDLI-GTSI---------NSPDKVNLTIRPNAYSCGDM 608

  Fly   580 SNASRRKGRVLKLDTLLQLRSEAMTSPEQLKVPSTPMPTASS---PIAGRKPMPEEHCSGTSSAD 641
            .|..                         :...::.:|..||   ..:.:..:|..:.|..::..
  Rat   609 HNYC-------------------------INYVNSELPAESSNCFEFSNQGSLPFHNYSKVNNKR 648

  Fly   642 ESMETAHVPQ--ANTSASSTASSSGNSSNASSNSNGNSSSNSSSNGTTSAVAAPPSGTPAAAGAI 704
            .......|.:  ...|::.|.:....|.:.:::.....||||.|   ..|..:|.|||......|
  Rat   649 RRFSRGAVCENLQRESSNKTVTQQSTSDSDTTSPLRKESSNSDS---LLASISPLSGTLKIKTEI 710

  Fly   705 YECKYCDI----FFKDAVLYT 721
            .|  .||:    .|.:..|:|
  Rat   711 EE--PCDLEETQNFNEQSLFT 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 271..291 CDD:275368 6/19 (32%)
zf-H2C2_2 283..308 CDD:463886 8/24 (33%)
C2H2 Zn finger 299..319 CDD:275368 7/19 (37%)
C2H2 Zn finger 327..345 CDD:275368 6/51 (12%)
C2H2 Zn finger 707..727 CDD:275371 5/19 (26%)
C2H2 Zn finger 735..757 CDD:275371
Zfp518aNP_001025209.1 C2H2 Zn finger 181..203 CDD:275368 1/21 (5%)
C2H2 Zn finger 211..231 CDD:275368 6/19 (32%)
C2H2 Zn finger 238..258 CDD:275368 7/19 (37%)
zf-H2C2_2 250..271 CDD:463886 6/20 (30%)
C2H2 Zn finger 266..283 CDD:275368 3/16 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..394 8/38 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 464..484 7/21 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 656..694 9/40 (23%)
Blue background indicates that the domain is not in the aligned region.

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