DRSC/TRiP Functional Genomics Resources

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Protein Alignment hb and Zfp518a

DIOPT Version :9

Sequence 1:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001025209.1 Gene:Zfp518a / 309478 RGDID:1305314 Length:1478 Species:Rattus norvegicus


Alignment Length:736 Identity:145/736 - (19%)
Similarity:221/736 - (30%) Gaps:214/736 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 LPNP--MQH---FYGGNLRPSPQPTPTSASTIAPVAVATGSSEKLQALTPPMDVTPPKSPAKSSQ 194
            :||.  |:|   .|....:..||....|.| :..|:.|.|.:::.:  :...:....|..||.  
  Rat    59 IPNEILMKHEVEKYRKLFQSKPQTARKSVS-VRTVSCAKGCAQRCE--SERAEDEAGKMCAKI-- 118

  Fly   195 SNIEPEKEHDQMSNSSEDMKYMAESEDDDTNIRMPIYNSHGKMKNYKCKTCGVVAITKVDFWAHT 259
            .|....|..|:...|..|::...|..            .||::.::.|:.|...|.....|..|.
  Rat   119 LNFTCSKCQDRTQYSPNDLQKHFEMW------------HHGELPSFPCEMCSFSASDFQIFKQHR 171

  Fly   260 RTH----MKPDKI------------------------LQCPKCPFVTEFKHHLEYHIRKHKNQKP 296
            :||    :|.|..                        .||.:|.|.|:.......||.:|| :..
  Rat   172 KTHRNTFVKCDICNSERSYTLLDLTKHFTSKHCVNGNFQCEECRFFTQDVGTFVQHIHRHK-EVH 235

  Fly   297 FQCDKCSYTCVNKSMLNSHRKSHSSVYQYRCADCDY----------------------------- 332
            ::|.||.:.|..|..|..|.:.||....:.|..|.|                             
  Rat   236 YKCGKCHHLCFTKGELQKHLRVHSGTLPFTCHYCSYGAIHKDQLVRHVITLHKEHLYAKEKLERD 300

  Fly   333 -----ATKYCHSFKLHLRKYGHKPGMVL----------DEDGTPNPSL--VIDVYGTRRGPKS-- 378
                 ..|.....||.|::|...|....          ||....|...  ::....|:...:|  
  Rat   301 QYDKRVAKTTTGLKLILKRYKIGPTKTFWKRKTIASGNDESIGKNAQAFNIVSKTQTKSEDQSQE 365

  Fly   379 ----KNGG---------PIASGG------SGSGSRKSNVAAVAPQQQQSQPAQPVA--------- 415
                :.||         ||.||.      |.....|::..|.||....|....|..         
  Rat   366 QLNEEKGGRQHCEDGDKPIESGSEKATVLSTGQCNKADEGASAPSSVLSAVQGPTVLLVRNNKIT 430

  Fly   416 -TSQLSAALQGFPLVQGN-----SAPPAASPVLPLPASPAKSVASVEQTPSLPSPAN-------- 466
             .:..||...||.:|.|.     ...||...:||.||....:  ..|.|.:||..|.        
  Rat   431 IPANYSAKFMGFKMVDGRQHIVIKLLPANKQILPSPALQPNT--EKESTANLPPQAMDNTGFATG 493

  Fly   467 -----------------LLPPLASLLQQNRNMAFFPYWNLNLQMLAAQQQAAVLAQLSPRMREQL 514
                             ..|.|...:...:..||....|..|||:...:....|...|..:....
  Rat   494 LTAMNDTDFVKAAPLSCSSPELPRKVISEKETAFISEKNNMLQMVDDSKSVTSLPTPSESVTSVR 558

  Fly   515 QQQNQQQSDNEEEEQDDEYERKSVDSAMDLSQGTPVKEDEQQQQPQQPLAMNLKVEEEATPLMSS 579
            .....:..||.     |.:|..|..|..||. ||.:         ..|..:||.:...|......
  Rat   559 LTTKVEARDNV-----DLWENPSTQSHPDLI-GTSI---------NSPDKVNLTIRPNAYSCGDM 608

  Fly   580 SNASRRKGRVLKLDTLLQLRSEAMTSPEQLKVPSTPMPTASS---PIAGRKPMPEEHCSGTSSAD 641
            .|..                         :...::.:|..||   ..:.:..:|..:.|..::..
  Rat   609 HNYC-------------------------INYVNSELPAESSNCFEFSNQGSLPFHNYSKVNNKR 648

  Fly   642 ESMETAHVPQ--ANTSASSTASSSGNSSNASSNSNGNSSSNSSSNGTTSAVAAPPSGTPAAAGAI 704
            .......|.:  ...|::.|.:....|.:.:::.....||||.|   ..|..:|.|||......|
  Rat   649 RRFSRGAVCENLQRESSNKTVTQQSTSDSDTTSPLRKESSNSDS---LLASISPLSGTLKIKTEI 710

  Fly   705 YECKYCDI----FFKDAVLYT 721
            .|  .||:    .|.:..|:|
  Rat   711 EE--PCDLEETQNFNEQSLFT 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 271..291 CDD:275368 6/19 (32%)
zf-H2C2_2 283..308 CDD:290200 8/24 (33%)
C2H2 Zn finger 299..319 CDD:275368 7/19 (37%)
C2H2 Zn finger 327..345 CDD:275368 6/51 (12%)
C2H2 Zn finger 707..727 CDD:275371 5/19 (26%)
C2H2 Zn finger 735..757 CDD:275371
Zfp518aNP_001025209.1 C2H2 Zn finger 181..203 CDD:275368 1/21 (5%)
C2H2 Zn finger 211..231 CDD:275368 6/19 (32%)
C2H2 Zn finger 238..258 CDD:275368 7/19 (37%)
C2H2 Zn finger 266..283 CDD:275368 3/16 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..394 8/38 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 464..484 7/21 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 656..694 9/40 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350842
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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