DRSC/TRiP Functional Genomics Resources

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Protein Alignment hb and Zfp110

DIOPT Version :10

Sequence 1:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_006228173.1 Gene:Zfp110 / 308362 RGDID:1306339 Length:865 Species:Rattus norvegicus


Alignment Length:498 Identity:90/498 - (18%)
Similarity:139/498 - (27%) Gaps:222/498 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 ASSPRQSPIPSTNHLEQFLKQQQQQLQQQPMDTLCAMTPSPSQNDQNSLQ--------------- 90
            |.|| .||||....:..                     |:|....:|.:|               
  Rat   370 AISP-DSPIPVVKPIHD---------------------PNPKDLSRNGIQSTVFEIISQDRVQEI 412

  Fly    91 HYDANLQQQLLQQQQYQQH--FQAAQQQHHHHHHLMGGFNPLTPP-------------------- 133
            |...:.|..|||::.:.|.  .::::.|...:.|...|.....||                    
  Rat   413 HTIESNQAGLLQEKSHPQKKLSESSKSQEGTNLHKSQGSLDEVPPRKHVKVKQKGTRKGKDRKNT 477

  Fly   134 ----------------------GLPNPMQHFYG-GNLRPSPQPTPTSASTIAPVAV--------- 166
                                  |..|||.|.|. .|.|.|.|  .|:.:...|:.:         
  Rat   478 ISMTRGLRIRNQQKDSVEWQGRGDSNPMTHGYSIKNQRGSEQ--GTAGARRDPITLTVSAQFYQK 540

  Fly   167 ATGSSE-----KLQALTPPMDVTPPKSPAKS-----------SQSNIE----------------- 198
            ||||.|     ...|:.|.   ||.|...||           |.|:::                 
  Rat   541 ATGSEEGRFRDNSNAIVPD---TPTKIHQKSPEWHKVGRSNNSMSSVQNDQMGSGAGRGRDNTIL 602

  Fly   199 ----PEKEHD---------------------QMSNSSEDMKYMAESEDDDTNIRMPIYNSH---- 234
                |.|.|.                     |..:..|.::.::.||.     .:|...:|    
  Rat   603 THALPVKIHQKGYEEGKVQGNRNSLRHVKAHQKGSKGERVRELSTSEK-----HVPYIKNHLKTS 662

  Fly   235 ----GKMKN-------------------------------------------------YKCKTCG 246
                |:..|                                                 .:|..||
  Rat   663 EREKGRENNDSIKYGPYIKTCYRGSEVRKLRRANNCTKAISRHAQQIFFIKIHKGSQVCRCSECG 727

  Fly   247 VVAITKVDFWAHTRTHM--KPDKILQCPKCPFVTEFKHHLEYHIRKHKNQKPFQCDKCSYTCVNK 309
            .:......|..|.:.|.  :|...:.|.|. ||.  ...|..|:|.|..::||:|.:|..|..::
  Rat   728 KMFRNSRYFSVHKKIHTGERPYMCMACGKA-FVQ--SSSLTQHLRIHSGERPFECSECGRTFNDR 789

  Fly   310 SMLNSHRKSHSSVYQYRCADCDYATKYCHSFKLHLRKY-GHKP 351
            |.::.|.::|:....|.|..|..|.:.......|.|.: |.:|
  Rat   790 SAISQHLRTHTGAKPYHCQHCGKAFRQSSHLTRHERTHTGERP 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 271..291 CDD:275368 7/19 (37%)
zf-H2C2_2 283..308 CDD:463886 9/24 (38%)
C2H2 Zn finger 299..319 CDD:275368 5/19 (26%)
C2H2 Zn finger 327..345 CDD:275368 4/17 (24%)
C2H2 Zn finger 707..727 CDD:275371
C2H2 Zn finger 735..757 CDD:275371
Zfp110XP_006228173.1 KRAB 57..116 CDD:214630
SCAN 200..282 CDD:460417
KRAB 320..361 CDD:460171
C2H2 Zn finger 696..715 CDD:275370 0/18 (0%)
C2H2 Zn finger 723..743 CDD:275368 5/19 (26%)
zf-H2C2_2 739..760 CDD:463886 6/21 (29%)
C2H2 Zn finger 751..771 CDD:275368 7/22 (32%)
zf-H2C2_2 763..787 CDD:463886 9/23 (39%)
zf-C2H2 777..799 CDD:395048 6/21 (29%)
C2H2 Zn finger 779..799 CDD:275368 5/19 (26%)
zf-C2H2 805..827 CDD:395048 6/21 (29%)
C2H2 Zn finger 807..827 CDD:275368 5/19 (26%)
zf-H2C2_2 819..844 CDD:463886 4/14 (29%)
C2H2 Zn finger 835..855 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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