DRSC/TRiP Functional Genomics Resources

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Protein Alignment hb and sfc2

DIOPT Version :9

Sequence 1:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_594670.1 Gene:sfc2 / 2542887 PomBaseID:SPAC144.09c Length:374 Species:Schizosaccharomyces pombe


Alignment Length:89 Identity:28/89 - (31%)
Similarity:41/89 - (46%) Gaps:14/89 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 KILQCP--KCPFVTEFKHHLEYHIRKHKNQKPFQCD--KCSYTCVNKSMLNSHRKSHSSVYQYRC 327
            ||..||  :|.........||.|:|.|.|::||.||  .||.....||.|..|::.|::|..:.|
pombe    21 KIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSC 85

  Fly   328 ----ADCDYATKYCHSFKLHLRKY 347
                .|..:.|:.      ||.::
pombe    86 HYDGCDAQFYTQQ------HLERH 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368
C2H2 Zn finger 271..291 CDD:275368 7/21 (33%)
zf-H2C2_2 283..308 CDD:290200 12/26 (46%)
C2H2 Zn finger 299..319 CDD:275368 8/21 (38%)
C2H2 Zn finger 327..345 CDD:275368 4/21 (19%)
C2H2 Zn finger 707..727 CDD:275371
C2H2 Zn finger 735..757 CDD:275371
sfc2NP_594670.1 COG5048 1..374 CDD:227381 28/89 (31%)
C2H2 Zn finger 28..47 CDD:275368 5/18 (28%)
C2H2 Zn finger 55..77 CDD:275368 8/21 (38%)
C2H2 Zn finger 85..107 CDD:275368 5/25 (20%)
C2H2 Zn finger 115..138 CDD:275368
C2H2 Zn finger 146..165 CDD:275368
C2H2 Zn finger 206..226 CDD:275368
C2H2 Zn finger 238..261 CDD:275368
C2H2 Zn finger 269..286 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24393
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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