DRSC/TRiP Functional Genomics Resources

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Protein Alignment hb and Zscan5b

DIOPT Version :10

Sequence 1:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_573467.2 Gene:Zscan5b / 170734 MGIID:2159640 Length:468 Species:Mus musculus


Alignment Length:328 Identity:72/328 - (21%)
Similarity:112/328 - (34%) Gaps:94/328 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 SPRQSPIPSTNHLEQ--FLKQQQQQLQQQPMDTLCAMTPSPSQNDQNSLQHYDAN---------- 95
            ||....:|.....|.  |:.|          |.|.|:.|:.|...:.::|..:..          
Mouse   210 SPGSDSVPDLEEAEASVFVGQ----------DPLPALGPAGSLGVKGAVQPQEDTVVDAVPSFTH 264

  Fly    96 -LQQQLLQQQQYQQHFQAAQQQHHHHHHLMGGFNPLTPPGLPNPMQHFYGGNLRPSPQPTPTSAS 159
             |::.|...:..|.               :.|||..|..|:.:     |.||             
Mouse   265 ILERDLALNRDLQS---------------LSGFNLPTSQGVAS-----YMGN------------- 296

  Fly   160 TIAPVAVATGSSEKLQALTPPMDVTPPKSPAKSSQSNIEPEKEHDQMSNS-----SEDMKYMAES 219
                      :.:.|:|..|        .||     |.:|||:.|.::..     :|..|.....
Mouse   297 ----------TEDGLEAANP--------EPA-----NPQPEKQVDSLAGQARFQCTECKKSFLYK 338

  Fly   220 EDDDTNIRMPIYNSHGKMKNYKCKTCGVVAITKVDFWAHTRTHMKPDKILQCPKCPFVTEFKH-- 282
            ...|.:.|     ||...:.:||..|....:...|...|.|.| ..:|...|..|..  ||.|  
Mouse   339 SRFDLHQR-----SHTGERPFKCILCNKAFVQSSDLRVHQRVH-TGEKPYMCEVCGM--EFAHGS 395

  Fly   283 HLEYHIRKHKNQKPFQCDKCSYTCVNKSMLNSHRKSHSSVYQYRCADCDYATKYCHSFKLHLRKY 347
            .|:.|.|.|..:|||.|..|.....:|..||.|.:.|.::..|.|..|:...:...::|.|::.:
Mouse   396 TLQGHSRVHTKEKPFVCKDCGQRFCHKGNLNVHFRIHCNLRPYVCKKCNKTFRQQGTWKRHMKTH 460

  Fly   348 GHK 350
            ..|
Mouse   461 LRK 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 271..291 CDD:275368 8/21 (38%)
zf-H2C2_2 283..308 CDD:463886 9/24 (38%)
C2H2 Zn finger 299..319 CDD:275368 6/19 (32%)
C2H2 Zn finger 327..345 CDD:275368 4/17 (24%)
C2H2 Zn finger 707..727 CDD:275371
C2H2 Zn finger 735..757 CDD:275371
Zscan5bNP_573467.2 SCAN 33..117 CDD:153421
C2H2 Zn finger 328..348 CDD:275368 4/24 (17%)
zf-H2C2_2 344..365 CDD:463886 6/25 (24%)
C2H2 Zn finger 356..376 CDD:275368 5/19 (26%)
zf-H2C2_2 368..393 CDD:463886 9/27 (33%)
C2H2 Zn finger 384..404 CDD:275368 8/21 (38%)
zf-C2H2 410..432 CDD:395048 7/21 (33%)
C2H2 Zn finger 412..432 CDD:275368 6/19 (32%)
zf-C2H2 438..460 CDD:395048 5/21 (24%)
C2H2 Zn finger 440..460 CDD:275370 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.

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