DRSC/TRiP Functional Genomics Resources

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Protein Alignment hb and Peg3

DIOPT Version :9

Sequence 1:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_017444130.1 Gene:Peg3 / 103691034 RGDID:2323590 Length:1660 Species:Rattus norvegicus


Alignment Length:655 Identity:128/655 - (19%)
Similarity:208/655 - (31%) Gaps:182/655 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 PMDVTP-PKSPAKSSQSNIEPEKEH--DQMSNSSE---DMKYMAESEDDDTNIRMPI-------- 230
            |.|..| .|.|......:.||:.:.  ||...|.|   |..:..|...|:.:.:.|:        
  Rat  1081 PQDKEPQDKEPQDKQPQDKEPQDKEPLDQEMRSEEPHGDQPHGQEPHGDEPHDKEPVDQEMPSEE 1145

  Fly   231 ---YNSHGKMKN----------------------YKCKTCGVVAITKVDFWAHTRTHMKPDKILQ 270
               ..|||:.|.                      |:|:.||:......|..:|...|.:...:..
  Rat  1146 PQGEESHGQEKAEDITIETSVSEEPQKDDAGDAIYECQDCGLGFADLNDLTSHQDVHSRKSLVDS 1210

  Fly   271 CPKCPFVTEFKHHLEYHI-------RKHKNQKPFQCDKCSYTCVNKSMLNSHRKSHSSVYQYRCA 328
                   .|:.|. |.|:       :|:..:|.::|.||..:.::.|:|..|::.|..       
  Rat  1211 -------REYTHS-EVHVHSVSEFEKKYSGEKLYECPKCGESFIHSSLLFEHQRVHEQ------- 1260

  Fly   329 DCDYATKYCHSFKLHLRKYGHKPGMVLDEDGTPNPSLVIDVYGTRRGPKSKNGGPIASGGSGSGS 393
            |..|:.|.|..            |.:......|..:..::     |.| :.:|..|.....|.|.
  Rat  1261 DQTYSVKACDD------------GFIALLPARPRRNCTVE-----RNP-AVSGSAIRCRQCGQGF 1307

  Fly   394 RKSNVAAVAPQQQQSQPAQPVATSQLS--AALQGFPLV--QGNSAPPAASPVL------------ 442
            ..|  :|:....:|.:..:.:..::|:  ..:||..|.  ||:..........            
  Rat  1308 IHS--SALNEHMRQHRDNEILEQNELADEIFIQGLALTEYQGSETEEKLFECTICGECFFTAKQL 1370

  Fly   443 -----------PLPASPAKSVASVEQTPSLPSPANLLPPL-------ASLLQQ---NRNMAFFPY 486
                       |....|:.:.||.     |..|.....||       .|.|..   ...|.|.|.
  Rat  1371 GDHHTKVHKDEPYEYGPSYTHASF-----LTEPLRKHIPLYECKDCGQSFLDDTVITERMVFHPE 1430

  Fly   487 WNLNLQMLAAQQQAAVLAQLSPRMREQLQQQNQQQSDNEEEEQDDEYE--RKSVDSA-----MDL 544
            .....:::||..|......|.|:...::|..|.:.::.|.|..:.|.|  ...|::|     .:.
  Rat  1431 REGGSEIVAATAQEVEANVLIPQEVLRIQGSNAEAAEPEVEAAEPEVEAAEPEVEAAEPNGEAEG 1495

  Fly   545 SQGTPVKEDEQQQQP----QQPLAMNLKVEEEATPLMSSSNASRRKGRVLKLDTLLQLRSEAMTS 605
            ..|...:.|.:.:||    :||                :.:|....|..:: |.     .|....
  Rat  1496 PDGEAAEPDGEAEQPNGEAEQP----------------NGDADEPDGAGIE-DP-----EERADE 1538

  Fly   606 PEQLKVPSTPMPTASSPIAGRKPMPEEHCSGTSSADESMETAHVPQ------ANTSASSTASSSG 664
            ||:  ....|...|..|.......|||     ...|:.:|... |.      |.|.|||.|....
  Rat  1539 PEE--DVEEPEGDADEPDGADIEDPEE-----EGEDQEIEVEE-PYYNCHECAETFASSAAFGEH 1595

  Fly   665 NSSNAS------SNSNGNSSSNSSSNGTTSAVAAPPSGTPAAAGAIYECKYCDIFFKDAVLYTIH 723
            ..|:||      :|:.|..|      |.....:....|...|....::|..|...|.|.:....|
  Rat  1596 LKSHASVIIFEPANALGECS------GYIERASTSAGGAEQADDKYFKCDVCGQLFNDRLSLARH 1654

  Fly   724 MGYHS 728
            ...|:
  Rat  1655 QNSHT 1659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 271..291 CDD:275368 4/26 (15%)
zf-H2C2_2 283..308 CDD:290200 7/31 (23%)
C2H2 Zn finger 299..319 CDD:275368 6/19 (32%)
C2H2 Zn finger 327..345 CDD:275368 4/17 (24%)
C2H2 Zn finger 707..727 CDD:275371 5/19 (26%)
C2H2 Zn finger 735..757 CDD:275371
Peg3XP_017444130.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350841
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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