DRSC/TRiP Functional Genomics Resources

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Protein Alignment hb and Peg3

DIOPT Version :10

Sequence 1:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_017444130.1 Gene:Peg3 / 103691034 RGDID:2323590 Length:1660 Species:Rattus norvegicus


Alignment Length:655 Identity:128/655 - (19%)
Similarity:208/655 - (31%) Gaps:182/655 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 PMDVTP-PKSPAKSSQSNIEPEKEH--DQMSNSSE---DMKYMAESEDDDTNIRMPI-------- 230
            |.|..| .|.|......:.||:.:.  ||...|.|   |..:..|...|:.:.:.|:        
  Rat  1081 PQDKEPQDKEPQDKQPQDKEPQDKEPLDQEMRSEEPHGDQPHGQEPHGDEPHDKEPVDQEMPSEE 1145

  Fly   231 ---YNSHGKMKN----------------------YKCKTCGVVAITKVDFWAHTRTHMKPDKILQ 270
               ..|||:.|.                      |:|:.||:......|..:|...|.:...:..
  Rat  1146 PQGEESHGQEKAEDITIETSVSEEPQKDDAGDAIYECQDCGLGFADLNDLTSHQDVHSRKSLVDS 1210

  Fly   271 CPKCPFVTEFKHHLEYHI-------RKHKNQKPFQCDKCSYTCVNKSMLNSHRKSHSSVYQYRCA 328
                   .|:.|. |.|:       :|:..:|.::|.||..:.::.|:|..|::.|..       
  Rat  1211 -------REYTHS-EVHVHSVSEFEKKYSGEKLYECPKCGESFIHSSLLFEHQRVHEQ------- 1260

  Fly   329 DCDYATKYCHSFKLHLRKYGHKPGMVLDEDGTPNPSLVIDVYGTRRGPKSKNGGPIASGGSGSGS 393
            |..|:.|.|..            |.:......|..:..::     |.| :.:|..|.....|.|.
  Rat  1261 DQTYSVKACDD------------GFIALLPARPRRNCTVE-----RNP-AVSGSAIRCRQCGQGF 1307

  Fly   394 RKSNVAAVAPQQQQSQPAQPVATSQLS--AALQGFPLV--QGNSAPPAASPVL------------ 442
            ..|  :|:....:|.:..:.:..::|:  ..:||..|.  ||:..........            
  Rat  1308 IHS--SALNEHMRQHRDNEILEQNELADEIFIQGLALTEYQGSETEEKLFECTICGECFFTAKQL 1370

  Fly   443 -----------PLPASPAKSVASVEQTPSLPSPANLLPPL-------ASLLQQ---NRNMAFFPY 486
                       |....|:.:.||.     |..|.....||       .|.|..   ...|.|.|.
  Rat  1371 GDHHTKVHKDEPYEYGPSYTHASF-----LTEPLRKHIPLYECKDCGQSFLDDTVITERMVFHPE 1430

  Fly   487 WNLNLQMLAAQQQAAVLAQLSPRMREQLQQQNQQQSDNEEEEQDDEYE--RKSVDSA-----MDL 544
            .....:::||..|......|.|:...::|..|.:.::.|.|..:.|.|  ...|::|     .:.
  Rat  1431 REGGSEIVAATAQEVEANVLIPQEVLRIQGSNAEAAEPEVEAAEPEVEAAEPEVEAAEPNGEAEG 1495

  Fly   545 SQGTPVKEDEQQQQP----QQPLAMNLKVEEEATPLMSSSNASRRKGRVLKLDTLLQLRSEAMTS 605
            ..|...:.|.:.:||    :||                :.:|....|..:: |.     .|....
  Rat  1496 PDGEAAEPDGEAEQPNGEAEQP----------------NGDADEPDGAGIE-DP-----EERADE 1538

  Fly   606 PEQLKVPSTPMPTASSPIAGRKPMPEEHCSGTSSADESMETAHVPQ------ANTSASSTASSSG 664
            ||:  ....|...|..|.......|||     ...|:.:|... |.      |.|.|||.|....
  Rat  1539 PEE--DVEEPEGDADEPDGADIEDPEE-----EGEDQEIEVEE-PYYNCHECAETFASSAAFGEH 1595

  Fly   665 NSSNAS------SNSNGNSSSNSSSNGTTSAVAAPPSGTPAAAGAIYECKYCDIFFKDAVLYTIH 723
            ..|:||      :|:.|..|      |.....:....|...|....::|..|...|.|.:....|
  Rat  1596 LKSHASVIIFEPANALGECS------GYIERASTSAGGAEQADDKYFKCDVCGQLFNDRLSLARH 1654

  Fly   724 MGYHS 728
            ...|:
  Rat  1655 QNSHT 1659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 271..291 CDD:275368 4/26 (15%)
zf-H2C2_2 283..308 CDD:463886 7/31 (23%)
C2H2 Zn finger 299..319 CDD:275368 6/19 (32%)
C2H2 Zn finger 327..345 CDD:275368 4/17 (24%)
C2H2 Zn finger 707..727 CDD:275371 5/19 (26%)
C2H2 Zn finger 735..757 CDD:275371
Peg3XP_017444130.1 C2H2 Zn finger 408..428 CDD:275368
zf-C2H2 459..481 CDD:395048
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 519..539 CDD:275368
C2H2 Zn finger 607..627 CDD:275368
C2H2 Zn finger 637..656 CDD:275368
zf-C2H2 934..956 CDD:395048
C2H2 Zn finger 936..956 CDD:275368
PHA03169 946..>1176 CDD:223003 19/94 (20%)
C2H2 Zn finger 1182..1202 CDD:275368 5/19 (26%)
zf-C2H2 1236..1258 CDD:395048 6/21 (29%)
C2H2 Zn finger 1238..1258 CDD:275368 6/19 (32%)
C2H2 Zn finger 1300..1320 CDD:275368 4/21 (19%)
C2H2 Zn finger 1357..1378 CDD:275368 0/20 (0%)
C2H2 Zn finger 1579..1599 CDD:275368 6/19 (32%)
C2H2 Zn finger 1638..1658 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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