DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL19 and AT5G11750

DIOPT Version :9

Sequence 1:NP_524284.1 Gene:mRpL19 / 41028 FlyBaseID:FBgn0037608 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_001332090.1 Gene:AT5G11750 / 831047 AraportID:AT5G11750 Length:253 Species:Arabidopsis thaliana


Alignment Length:174 Identity:40/174 - (22%)
Similarity:73/174 - (41%) Gaps:37/174 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QQCVYKRIVTFSTKTAEHVIENQEEQKKEAPPTTPTSPVNRKTIIPANYRFVYPEFLPDPKVEWR 78
            |:..:||:    .|||:|:::.|               :........|:...|         ...
plant   105 QRIKFKRL----DKTAKHIMQVQ---------------LKLDNYHGYNHVIFY---------LCH 141

  Fly    79 NLV----REKLERLDMLDRRKQIDLPEFYVGSVLAVTSSDPHAAGKTSRFVGICINRDRCGLRAR 139
            ||:    :|.:|.:     |...::||...|.::.:....|....:.|...|:.|.|...||.:.
plant   142 NLLQIVDKEAVEEV-----RNLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNST 201

  Fly   140 FILRNVIDHQGMEVVYELYDPTILKIEVLRLEKRLDDSLFYLRD 183
            |.:|.::...|:|.::.||.|.:.:|:|:..:|.....|:||||
plant   202 FRIRRLVAGVGVESMFPLYSPNLREIKVVDKKKVRRAKLYYLRD 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL19NP_524284.1 Ribosomal_L19 94..183 CDD:294284 24/88 (27%)
AT5G11750NP_001332090.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 50 1.000 Domainoid score I4361
eggNOG 1 0.900 - - E1_COG0335
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1387536at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101282
Panther 1 1.100 - - LDO PTHR15680
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.820

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