DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL19 and mrpl-19

DIOPT Version :9

Sequence 1:NP_524284.1 Gene:mRpL19 / 41028 FlyBaseID:FBgn0037608 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_491381.1 Gene:mrpl-19 / 172052 WormBaseID:WBGene00022470 Length:288 Species:Caenorhabditis elegans


Alignment Length:267 Identity:126/267 - (47%)
Similarity:170/267 - (63%) Gaps:17/267 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 QEEQKKEAPPTTPTSPVNRKTIIPANYRFVYPEFLPDPKVEWRNLVREKLERLDMLDRRKQIDLP 100
            :.|..:.||.|..||......:||| :..:||:||..|....||.::|:|||.|||:||..||:|
 Worm    20 KSEPTRAAPVTKKTSREEIAGLIPA-FPEIYPDFLQSPVWNRRNALKEELERQDMLERRMNIDIP 83

  Fly   101 EFYVGSVLAVTSSDPHAAGKTSRFVGICINRDRCGLRARFILRNVIDHQGMEVVYELYDPTILKI 165
            ||||||::||||||.:...|..|||||||.|::.||..:|.|||.|::.|:||||:||:|||.||
 Worm    84 EFYVGSIVAVTSSDKNLGSKEHRFVGICIRREKEGLLHQFTLRNTIENIGVEVVYDLYNPTIKKI 148

  Fly   166 EVLRLEKRLDDSLFYLRDALPEYSTFDENMEAEPLEEGAPVPVNDIKVVLRPRPWLERWERQNLR 230
            |.|:||||||:.|.||.||||||||||.:||.:....|.|:|||:.||.|:..||..|||..::|
 Worm   149 ETLKLEKRLDNDLSYLVDALPEYSTFDFHMEPQAHPAGTPIPVNECKVKLKTPPWTRRWEVASVR 213

  Fly   231 GV----ANIDEYLKDK-HRLSAAKVQKPWEKYDMMKDYRSSIPEEEQTEIFAE-----VHTELHA 285
            |:    .....:.|.| |:    .:...:||||::.|||:|..:|:  |:|.:     ...|.||
 Worm   214 GIEDTWTQATPWFKRKLHK----TIVNDYEKYDLIADYRTSSTKEQ--EVFVQKQMQKFEKERHA 272

  Fly   286 LELQRKR 292
            ..|.|:|
 Worm   273 AGLTRRR 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL19NP_524284.1 Ribosomal_L19 94..183 CDD:294284 55/88 (63%)
mrpl-19NP_491381.1 Ribosomal_L19 75..>155 CDD:294284 48/79 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165280
Domainoid 1 1.000 112 1.000 Domainoid score I3901
eggNOG 1 0.900 - - E1_COG0335
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8851
Inparanoid 1 1.050 225 1.000 Inparanoid score I2245
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG29207
OrthoDB 1 1.010 - - D1387536at2759
OrthoFinder 1 1.000 - - FOG0004273
OrthoInspector 1 1.000 - - oto17556
orthoMCL 1 0.900 - - OOG6_101282
Panther 1 1.100 - - LDO PTHR15680
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2755
SonicParanoid 1 1.000 - - X5327
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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