DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8032 and LDL1

DIOPT Version :10

Sequence 1:NP_649811.1 Gene:CG8032 / 41026 FlyBaseID:FBgn0037606 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_176471.1 Gene:LDL1 / 842582 AraportID:AT1G62830 Length:844 Species:Arabidopsis thaliana


Alignment Length:593 Identity:145/593 - (24%)
Similarity:242/593 - (40%) Gaps:145/593 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EEGMANIGSAGA----------GDQPQTSGNNTNVKIVIIGAGMAGLSAANHLLQNGCDDFLILE 70
            |.|..|.|.|..          |.:|.        .:|::|||:|||.||..||..|. ..|:||
plant   240 EHGYINFGLAPVIKEAKLRSFDGVEPP--------NVVVVGAGLAGLVAARQLLSMGF-RVLVLE 295

  Fly    71 ARGRVGGRIVSIPLSNNQKIE----LGANWIHGVLGNPIFELAVQHGL-------VSVVNVPKPH 124
            .|.|.|||:.:..:.....:|    :|.:.:.|:.|||:..||.|.||       :..:.:|...
plant   296 GRDRPGGRVKTRKMKGGDGVEAMADVGGSVLTGINGNPLGVLARQLGLPLHKVRDICPLYLPNGE 360

  Fly   125 KVVATTEDGHQVPFNILQEIYEAYVCFLRRCDEYFLCQYSPPPDIHSVGEHINYEIEIYLSGVQD 189
            ...|:.:...:..||.|.:    .||.||:.    :.:.:...|: .:||.:.....:|  ||.:
plant   361 LADASVDSKIEASFNKLLD----RVCKLRQS----MIEENKSVDV-PLGEALETFRLVY--GVAE 414

  Fly   190 PKEKR--LKQSIFNCLLKRETCITGCNNM---DEVDLLEL-GSYTELQGGNIVLPTGYSSILRPL 248
            .:::|  |...:.|......| :.|..:|   |:.|..|: |.:..:.|||              
plant   415 DQQERMLLDWHLANLEYANAT-LLGNLSMAYWDQDDPYEMGGDHCFIPGGN-------------- 464

  Fly   249 GAQIAKQSILTKCPVKKIHWKRKKTFTGLETVDENSEDEHSDDSERTVTEVPTGEIRGASVESNT 313
              :|...::....|:                                        ..|::|||  
plant   465 --EIFVHALAENLPI----------------------------------------FYGSTVES-- 485

  Fly   314 SSNCDYPAGNVRIDCEDGRVFHAAHVICTIPLGVLKNTHRTLFDPVLPQYKQESIENLMFGTVDK 378
               ..|.:..|.: ....:.||....:||:||||||. ....|.|.||..|:|:|:.|.||.::|
plant   486 ---IRYGSNGVLV-YTGNKEFHCDMALCTVPLGVLKK-GSIEFYPELPHKKKEAIQRLGFGLLNK 545

  Fly   379 IFLEYERPFLSADISEIMLLWDDDKRDMNSSEEELASEAYLSKNWFKKIYSFAKVT-DTLLLGWV 442
            :.:.:...|...:|.....|.:|..                ::..|...||::.|: ..||:..|
plant   546 VAMLFPCNFWGEEIDTFGRLTEDPS----------------TRGEFFLFYSYSSVSGGPLLVALV 594

  Fly   443 SGREAEYMEKLDHEAVAEKCTEILRNFLQDP--YVPKPKRCVCTSWKSQDFTGGAYTSIPVGATQ 505
            :|..||..|.|......::..:|||......  .||.|.:.:|:.|....|:.|:|:.:.||::.
plant   595 AGDAAERFETLSPTDSVKRVLQILRGIYHPKGIVVPDPVQALCSRWGQDKFSYGSYSYVAVGSSG 659

  Fly   506 EDIENLAQPLYATPQAMKPAIVFAGEHTHSSFYSTVHGAYLSGRTAAQHLL------ASD---EP 561
            :|.:.||:      ......:.||||.|:..:.:|:|||:|||...|.::|      ||.   .|
plant   660 DDYDILAE------SVGDGRVFFAGEATNRQYPATMHGAFLSGMREAANILRVARRRASSSALNP 718

  Fly   562 DEIIMESD 569
            ::|.::.:
plant   719 NQICIDKE 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8032NP_649811.1 Amino_oxidase 49..556 CDD:396255 129/526 (25%)
LDL1NP_176471.1 PLN02328 1..844 CDD:215187 145/593 (24%)

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