DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8032 and kdm1a

DIOPT Version :10

Sequence 1:NP_649811.1 Gene:CG8032 / 41026 FlyBaseID:FBgn0037606 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001229924.1 Gene:kdm1a / 558450 ZFINID:ZDB-GENE-030131-7828 Length:833 Species:Danio rerio


Alignment Length:608 Identity:154/608 - (25%)
Similarity:245/608 - (40%) Gaps:144/608 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KIVIIGAGMAGLSAANHLLQNGCDDFLILEARGRVGGRIVSIPLSNNQKIELGANWIHGVLGN-- 103
            |:::||||::||:||..|...|. |..:||:|.|||||:.:. ...|...:|||..:.|:.||  
Zfish   254 KVIVIGAGVSGLAAARQLQSFGM-DVTVLESRDRVGGRVATF-RKGNYVADLGAMVVTGLGGNPM 316

  Fly   104 ------------------PIFELAVQHGLVSVVNVPKP----------HKVVATTEDGHQVPFNI 140
                              |::|...|.| ....:|||.          ..:.||:...||:.||.
Zfish   317 AVVSKQVNMELAKIKQKCPLYEANGQAG-ERCTSVPKEKDEMVEQEFNRLLEATSYLSHQLDFNF 380

  Fly   141 LQ----EIYEAYVCFLRRCDEYFLCQYSPPPDIHSVGEHINY---------EIEIYLSGVQDPKE 192
            |.    .:.:|....::..::            |...|.|.:         |::..|:.:...||
Zfish   381 LNNKPVSLGQALEVVIQLQEK------------HVKDEQIEHWKKIVKTQEELKDLLNKMVTTKE 433

  Fly   193 --KRLKQSI---------------FNCLLKRETCITGCNNMDEVDLLELGSYTELQ------GGN 234
              |.|.|..               |....|.......|...||:..:::.....||      ..:
Zfish   434 KVKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELVEMQVKLEERLQELEANPPSD 498

  Fly   235 IVLPTGYSSIL--RPLGAQIAKQSILTKCPVKKIHWKRKKTFTGLETVDENSEDEHSDDSERTVT 297
            :.|.:....||  .....:.|..:.|:...:|  ||             :..:|.....|..||.
Zfish   499 VYLSSRDRQILDWHFANLEFANATPLSTLSLK--HW-------------DQDDDFEFTGSHLTVR 548

  Fly   298 E----VPTGEIRGASVESN--------TSSNCDYPAGNVRIDCEDGRVFHAAHVICTIPLGVLKN 350
            .    ||.....|..::.|        |||.|:..|.|.|...:. .::....|:||:||||:|.
Zfish   549 NGYSCVPVALAEGLDIKLNTAVRQVRYTSSGCEVIAVNTRSTTQT-FIYKCDAVLCTLPLGVMKQ 612

  Fly   351 THRTL-FDPVLPQYKQESIENLMFGTVDKIFLEYERPFLSADISEIMLLWDDDKRDMNSSEEELA 414
            ....: |.|.||::|..:|:.:.||.::|:.|.::|.|           ||.............|
Zfish   613 QPPAVQFVPPLPEWKTAAIQRMGFGNLNKVVLCFDRVF-----------WDPSVNLFGHVGSTTA 666

  Fly   415 S--EAYLSKNWFKKIYSFAKVTDTLLLGWVSGREAEYMEKLDHEAVAEKCTEILRNFLQDPYVPK 477
            |  |.:|..|.:|.         .:||..::|..|..||.:..:.:..:|..||:.......||:
Zfish   667 SRGELFLFWNLYKA---------PILLALMAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQ 722

  Fly   478 PKRCVCTSWKSQDFTGGAYTSIPVGATQEDIENLAQPLY---ATPQAMKPA--IVFAGEHTHSSF 537
            ||..|.:.|::..:..|:|:.:..|::..|.:.:|||:.   |.|.|.:|.  :.||||||..::
Zfish   723 PKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPAIPGASQPVPRLFFAGEHTIRNY 787

  Fly   538 YSTVHGAYLS-----GRTAAQHL 555
            .:|||||.||     ||.|.|.|
Zfish   788 PATVHGALLSGLREAGRIADQFL 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8032NP_649811.1 Amino_oxidase 49..556 CDD:396255 149/600 (25%)
kdm1aNP_001229924.1 PLN02328 157..805 CDD:215187 150/601 (25%)
COG1340 <375..>493 CDD:440951 22/129 (17%)

Return to query results.
Submit another query.