DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8032 and Su(var)3-3

DIOPT Version :10

Sequence 1:NP_649811.1 Gene:CG8032 / 41026 FlyBaseID:FBgn0037606 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_649194.1 Gene:Su(var)3-3 / 40217 FlyBaseID:FBgn0260397 Length:890 Species:Drosophila melanogaster


Alignment Length:603 Identity:148/603 - (24%)
Similarity:250/603 - (41%) Gaps:146/603 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KIVIIGAGMAGLSAANHLLQNGCDDFLILEARGRVGGRIVSIPLSNNQKIELGANWIHGVLGNPI 105
            |:::||||::||:.|:.|.|.|. |.::||||.|||||| |....|:...::||..:.||.|||:
  Fly   266 KVIVIGAGISGLAVAHQLQQFGM-DVIVLEARDRVGGRI-STFRKNSYIADVGAMVVTGVYGNPM 328

  Fly   106 FELAVQHG--LVSVVN-----------VPKPHKVVATTED----------GHQVPFNILQEIYEA 147
            ..|:.|.|  ||.:..           |||....|...|.          .|::.||...:    
  Fly   329 TILSKQIGMDLVPIQQTCPLYGPDGKPVPKEKDDVIEREFNRLLESASYLSHRLDFNYAGD---- 389

  Fly   148 YVCFLRRCDEY-FLCQYSPPPDIHSVGEHINYEIEIYLSGVQDPKEKRLKQ-------------- 197
              |.:...|.. ::........:|..|:|:...|......::  :.:|||.              
  Fly   390 --CPVSLGDALEWIISMQEMQVMHKRGQHMQEIIATQTKIIE--QRRRLKTLRDTIGKLKNEHLA 450

  Fly   198 ---------------------SIFNCLLKRETCITGCNNMDEVDLLELGSYTELQGG-------- 233
                                 :|.|..:|.|..|:..:::...:...|....||:..        
  Fly   451 MINQRKPKGTDGDLKYCYQEFNIRNTQIKMEETISTFHDLHAEEKQMLAKLHELEQNRPSDVYLS 515

  Fly   234 ---NIVLPTGYSSILRPLGAQIAKQSILTKCPVKKIHWKRKKTFTGLETVDENSEDE---HSDDS 292
               .::|...::::      :.|..:.|....:|  ||            |::.:.|   |....
  Fly   516 SRDRLILDWHFANL------EFANATRLNNLSLK--HW------------DQDDDFEFIGHHTTV 560

  Fly   293 ERTVTEVPTGEIRGASVESNTS-SNCDYPAGNVRIDCEDGR------VFHAAHVICTIPLGVLK- 349
            ....:.||........:..|:: ....|....|.:..|:.:      .:.|..|:||:.||||| 
  Fly   561 RNGYSCVPVALTENLDIRVNSAVKEIKYGTKGVEVVAENLKTSNSQMTYKADLVVCTLTLGVLKV 625

  Fly   350 --------NTHRTLFDPVLPQYKQESIENLMFGTVDKIFLEYERPFLSADISEIMLLWDDDKRDM 406
                    .::...|||.||.:||::|:.|.||.::|:.|.::|.|           ||.:....
  Fly   626 AVAHKESQQSNTVKFDPPLPDWKQQAIKRLGFGNLNKVVLCFDRIF-----------WDPNANLF 679

  Fly   407 NSSEEELASEAYLSKNWFKKIYSFAKVTDT-LLLGWVSGREAEYMEKLDHEAVAEKCTEILRNFL 470
            .......||..        :::.|..::.: :||..|:|..|..:|.:..:.:..:|..:|:|..
  Fly   680 GHVGSTTASRG--------EMFLFWSISSSPVLLALVAGMAANLVESVTDDIIIGRCMSVLKNIF 736

  Fly   471 QDPYVPKPKRCVCTSWKSQDFTGGAYTSIPVGATQEDIENLAQPLYATPQAMK-----PAIVFAG 530
            .:..||:||..|.|.|:|..:..|:|:.:.||::..|.:.||.|:  .|.:.|     |.:.|||
  Fly   737 GNTSVPQPKETVVTRWRSDPWARGSYSYVSVGSSGSDYDLLAAPV--IPPSSKDAEGLPRLFFAG 799

  Fly   531 EHTHSSFYSTVHGAYLSG 548
            |||..::.:|||||||||
  Fly   800 EHTIRNYPATVHGAYLSG 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8032NP_649811.1 Amino_oxidase 49..556 CDD:396255 143/595 (24%)
Su(var)3-3NP_649194.1 PLN03000 74..>827 CDD:178578 148/603 (25%)

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