DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8032 and Su(var)3-3

DIOPT Version :9

Sequence 1:NP_001262380.1 Gene:CG8032 / 41026 FlyBaseID:FBgn0037606 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_649194.1 Gene:Su(var)3-3 / 40217 FlyBaseID:FBgn0260397 Length:890 Species:Drosophila melanogaster


Alignment Length:603 Identity:148/603 - (24%)
Similarity:250/603 - (41%) Gaps:146/603 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KIVIIGAGMAGLSAANHLLQNGCDDFLILEARGRVGGRIVSIPLSNNQKIELGANWIHGVLGNPI 105
            |:::||||::||:.|:.|.|.|. |.::||||.|||||| |....|:...::||..:.||.|||:
  Fly   266 KVIVIGAGISGLAVAHQLQQFGM-DVIVLEARDRVGGRI-STFRKNSYIADVGAMVVTGVYGNPM 328

  Fly   106 FELAVQHG--LVSVVN-----------VPKPHKVVATTED----------GHQVPFNILQEIYEA 147
            ..|:.|.|  ||.:..           |||....|...|.          .|::.||...:    
  Fly   329 TILSKQIGMDLVPIQQTCPLYGPDGKPVPKEKDDVIEREFNRLLESASYLSHRLDFNYAGD---- 389

  Fly   148 YVCFLRRCDEY-FLCQYSPPPDIHSVGEHINYEIEIYLSGVQDPKEKRLKQ-------------- 197
              |.:...|.. ::........:|..|:|:...|......::  :.:|||.              
  Fly   390 --CPVSLGDALEWIISMQEMQVMHKRGQHMQEIIATQTKIIE--QRRRLKTLRDTIGKLKNEHLA 450

  Fly   198 ---------------------SIFNCLLKRETCITGCNNMDEVDLLELGSYTELQGG-------- 233
                                 :|.|..:|.|..|:..:::...:...|....||:..        
  Fly   451 MINQRKPKGTDGDLKYCYQEFNIRNTQIKMEETISTFHDLHAEEKQMLAKLHELEQNRPSDVYLS 515

  Fly   234 ---NIVLPTGYSSILRPLGAQIAKQSILTKCPVKKIHWKRKKTFTGLETVDENSEDE---HSDDS 292
               .::|...::::      :.|..:.|....:|  ||            |::.:.|   |....
  Fly   516 SRDRLILDWHFANL------EFANATRLNNLSLK--HW------------DQDDDFEFIGHHTTV 560

  Fly   293 ERTVTEVPTGEIRGASVESNTS-SNCDYPAGNVRIDCEDGR------VFHAAHVICTIPLGVLK- 349
            ....:.||........:..|:: ....|....|.:..|:.:      .:.|..|:||:.||||| 
  Fly   561 RNGYSCVPVALTENLDIRVNSAVKEIKYGTKGVEVVAENLKTSNSQMTYKADLVVCTLTLGVLKV 625

  Fly   350 --------NTHRTLFDPVLPQYKQESIENLMFGTVDKIFLEYERPFLSADISEIMLLWDDDKRDM 406
                    .::...|||.||.:||::|:.|.||.::|:.|.::|.|           ||.:....
  Fly   626 AVAHKESQQSNTVKFDPPLPDWKQQAIKRLGFGNLNKVVLCFDRIF-----------WDPNANLF 679

  Fly   407 NSSEEELASEAYLSKNWFKKIYSFAKVTDT-LLLGWVSGREAEYMEKLDHEAVAEKCTEILRNFL 470
            .......||..        :::.|..::.: :||..|:|..|..:|.:..:.:..:|..:|:|..
  Fly   680 GHVGSTTASRG--------EMFLFWSISSSPVLLALVAGMAANLVESVTDDIIIGRCMSVLKNIF 736

  Fly   471 QDPYVPKPKRCVCTSWKSQDFTGGAYTSIPVGATQEDIENLAQPLYATPQAMK-----PAIVFAG 530
            .:..||:||..|.|.|:|..:..|:|:.:.||::..|.:.||.|:  .|.:.|     |.:.|||
  Fly   737 GNTSVPQPKETVVTRWRSDPWARGSYSYVSVGSSGSDYDLLAAPV--IPPSSKDAEGLPRLFFAG 799

  Fly   531 EHTHSSFYSTVHGAYLSG 548
            |||..::.:|||||||||
  Fly   800 EHTIRNYPATVHGAYLSG 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8032NP_001262380.1 NAD_binding_8 44..104 CDD:290186 28/59 (47%)
Amino_oxidase 49..556 CDD:279874 143/595 (24%)
Su(var)3-3NP_649194.1 SWIRM 165..250 CDD:282311
NAD_binding_8 269..327 CDD:290186 28/59 (47%)
Amino_oxidase 274..824 CDD:279874 143/595 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452810
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46708
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10742
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2622
SonicParanoid 00.000 Not matched by this tool.
54.970

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