DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8032 and KDM1B

DIOPT Version :10

Sequence 1:NP_649811.1 Gene:CG8032 / 41026 FlyBaseID:FBgn0037606 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001426046.1 Gene:KDM1B / 221656 HGNCID:21577 Length:832 Species:Homo sapiens


Alignment Length:568 Identity:135/568 - (23%)
Similarity:222/568 - (39%) Gaps:127/568 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TEEGMANIG--SAGAGDQPQTSGNNTNVKIVIIGAGMAGLSAANHLLQNGCDDFLILEARGRVGG 77
            |.:|:.|.|  |.|| ||.....:..|..::|||||.|||:||..|...|. ...:|||:.|:||
Human   366 TRKGLINTGVLSVGA-DQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGI-KVTVLEAKDRIGG 428

  Fly    78 RIVSIPLSNNQKIELGANWIHGVLGNPIFELAVQHGLVSVVNVPKPHKVVATTEDGHQVP----- 137
            |:..........:..||..::|.:.||:..:..|.|    :::.|..:.....::|.::.     
Human   429 RVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQLG----ISMHKFGERCDLIQEGGRITDPTID 489

  Fly   138 ------FNILQEIYEAYVCFLRRCDEYFLCQYSPPPDIHSVGEHIN--YEIEIYLSGVQDPKEKR 194
                  ||.|.::...:     |.|:   .|....|    :||.|.  |:..|..||:|   ...
Human   490 KRMDFHFNALLDVVSEW-----RKDK---TQLQDVP----LGEKIEEIYKAFIKESGIQ---FSE 539

  Fly   195 LKQSIFNCLLKRETCITGCNNMDEV-----DLLELGSYTELQGGNIVLPTGYSSILRPL--GAQI 252
            |:..:....|.......| :|:.:|     |..|.  :.:..|.:.:|..|||.|:..|  |..|
Human   540 LEGQVLQFHLSNLEYACG-SNLHQVSARSWDHNEF--FAQFAGDHTLLTPGYSVIIEKLAEGLDI 601

  Fly   253 AKQSILTKCPVKKIHWKRKKTFTGLETVDENSEDEHSDDSERTVTEVPTGEIRGASVESNTSSNC 317
            ..:|...:|                                                       .
Human   602 QLKSPQVQC-------------------------------------------------------I 611

  Fly   318 DYPAGNVRIDCEDGRVFHAAHVICTIPLGVLKNTHRTLFDPVLPQYKQESIENLMFGTVDKIFLE 382
            ||....|::...||..:.|..|:.|:||.:|:. ....|:|.|.:.|.::|.:|..|.::||.|:
Human   612 DYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQK-GAIQFNPPLSEKKMKAINSLGAGIIEKIALQ 675

  Fly   383 YERPFLSADISEIMLLWDDDKR--DMNSSEEELASEAYLSKNWFKKIYSF-AKVTDTLLLGWVSG 444
            :...|           ||...:  |........||:    :..|...|.. .:...::|:..::|
Human   676 FPYRF-----------WDSKVQGADFFGHVPPSASK----RGLFAVFYDMDPQKKHSVLMSVIAG 725

  Fly   445 REAEYMEKLDHEAVAEKCTEILRNFLQDPYVPKPKRCVCTSWKSQDFTGGAYTSIPVGATQEDIE 509
            .....:..||.:.|.::|...||...::..||.|.:...|.|.:..:...||:.:..|.:.|..:
Human   726 EAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYD 790

  Fly   510 NLAQPLYATPQAMKPAIVFAGEHTHSSFYSTVHGAYLSGRTAAQHLLA 557
            .:|:.:..|       :.||||.|:..|..||.||||||...|..:.|
Human   791 IIAEDIQGT-------VFFAGEATNRHFPQTVTGAYLSGVREASKIAA 831

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8032NP_649811.1 Amino_oxidase 49..556 CDD:396255 119/529 (22%)
KDM1BNP_001426046.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..47
GLYR1-binding. /evidence=ECO:0000269|PubMed:23260659, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS, ECO:0007744|PDB:4GUT, ECO:0007744|PDB:4GUU 282..301
Histone H3-binding. /evidence=ECO:0000269|PubMed:23260659, ECO:0000269|PubMed:23266887, ECO:0007744|PDB:4FWF, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS 447..476 6/32 (19%)
Histone H3-binding. /evidence=ECO:0000269|PubMed:23260659, ECO:0000269|PubMed:23266887, ECO:0007744|PDB:4FWF, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS 496..507 3/15 (20%)
Histone H3-binding. /evidence=ECO:0000269|PubMed:23260659, ECO:0000269|PubMed:23266887, ECO:0007744|PDB:4FWF, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS 547..581 7/36 (19%)
GLYR1-binding. /evidence=ECO:0000269|PubMed:23260659, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS, ECO:0007744|PDB:4GUT, ECO:0007744|PDB:4GUU 573..575 0/3 (0%)
GLYR1-binding. /evidence=ECO:0000269|PubMed:23260659, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS, ECO:0007744|PDB:4GUT, ECO:0007744|PDB:4GUU 808..824 9/15 (60%)
Blue background indicates that the domain is not in the aligned region.

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