DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p and Hps5

DIOPT Version :10

Sequence 1:NP_649810.1 Gene:p / 41025 FlyBaseID:FBgn0086679 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001005247.2 Gene:Hps5 / 246694 MGIID:2180307 Length:1126 Species:Mus musculus


Alignment Length:795 Identity:189/795 - (23%)
Similarity:319/795 - (40%) Gaps:181/795 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 NRIKYTCFDISDSYIIFGASSGSLYLFNRNG-KFLLLIPNKHGAITSLS-ISANSKYVAFATQRS 87
            :|::.|...:|..::..|::.|.|.|..::| |..|.:.::.|||:.:: .|.:..|||.||.:.
Mouse    33 SRLRCTSIAVSRKWLALGSTGGGLNLIQKDGWKQRLFLSHREGAISQIACCSHDDDYVAVATSQG 97

  Fly    88 LICVYAVNLSAQATPQVIFTHLD-QSVQVTCIHWTQDEKQFYYGDSRGQVSLVLLSSF-----IG 146
            |:.|:.:|...:..|:.|....: :..:||.:.|.....:.:.||..|:||.:.|::.     ..
Mouse    98 LVVVWELNQERRGKPERIHVSSEHKGRKVTALCWDTAVLRVFVGDHVGKVSAIKLNTLKQAKAAA 162

  Fly   147 HSLLFNMTVHPLLYLDSPIVQIDDFEYLLLVSNCTKCILCNTEYEDYKQIGNRPRDGAFGACFFV 211
            ..::|  .|..:|.:||.:||:|..:..||||:.|:..||:||.|.:.:|||:.|.|.:|||||.
Mouse   163 AFVMF--PVQTVLTVDSCVVQLDYLDGRLLVSSLTRSFLCDTEREKFWKIGNKERHGEYGACFFP 225

  Fly   212 SPQESLQPSRIYCARPGSRVWEVDFEGEVIQTHQFKTALATAPARIQRPGSGTDELDANAE-LLD 275
            ......|...|||||||||:|||:|:|||:.|||||..|:..|..:         :.|.:| ..|
Mouse   226 GRCAGGQQPVIYCARPGSRMWEVNFDGEVLSTHQFKKLLSMPPLPV---------ITARSEPQYD 281

  Fly   276 Y---QPQNLQFAKVQRLNDDFLLAFTELGLYIFDIRRSAVVLWSNQFERIADCRSSGSEIFVFTQ 337
            :   ..|:|.|.|:..|::..:|.:||.|:|||..:...|:||| :.:.|.|.....:|:|....
Mouse   282 HTVGSSQSLAFPKLLHLSEHCVLTWTEKGIYIFIPQNVQVLLWS-EVKDIQDVAVYKNELFCLHF 345

  Fly   338 SG-----ALYSVQ----------LQTLQSHAVSLIQQSKLLPCANLLRQHVRYFADKAREDYELK 387
            :|     :|.||:          |..|.:....|.|.|              ....:||:.....
Mouse   346 NGKISHLSLLSVERCVERLLRRGLWDLAARTCCLFQNS--------------IITSRARKTLTAD 396

  Fly   388 QLNPLKQLLIERQEYELLNDISVIFDAITQCTGSALDTHSSGGSSATTERSLSGGSSSRAPPKGV 452
            :|..||..|          |::...:.|:|.....|.......:.::...|:|...|......|:
Mouse   397 KLEHLKSQL----------DLTACSELISQLDDLILRFEPLESACSSRRSSISSHESFSILDSGI 451

  Fly   453 YVLENAFCDNLKQPLKTGHFKDALLTVTGKFGKNIIKYKFNIFAEEQQQLVRELIPASERSLPFK 517
            |                                .||..:....::|..        .|..|..|.
Mouse   452 Y--------------------------------RIISSRRGSQSDEDS--------CSLHSQTFS 476

  Fly   518 DIKARYESGSEDQEEEIVRRC-----KKPAPQVPHISPEEKTLYNLYL-IAKSAKFSRTQCVDRY 576
            :.:...|..|..:||:..:.|     ::.|...|.:|..:|:  ..:| .:.:..|.....:...
Mouse   477 EDERLKEFASHQEEEQPEQGCGANRNEESASHSPVMSEVDKS--EAFLPFSIALPFRSPSPLVSL 539

  Fly   577 RAVFDEYAAGELVNLLEKLAQVMVEHGDTPDQAQRNCYEMYFDYLDPEM--IWEVDDATRDHIAA 639
            :||.|. .:..:....||:..:   ||                  .||:  .:|..||.|.|   
Mouse   540 QAVKDS-VSSFVRKTTEKIGTL---HG------------------SPELKEPFESKDADRAH--- 579

  Fly   640 GFVLLNTSQNAEIVKCEHCSFPLRFDT----------SCQYHELGAVLLRYFWSRGEQLKCFDVV 694
                   .:....|.|     ||..||          ..:..||.|..........:.|..|:  
Mouse   580 -------EEEVSAVTC-----PLEEDTEEKEIHQPPKEDRLQELTAATAEAMTKLLDPLVLFE-- 630

  Fly   695 QSVPALLDVLAKFYLAEQNLTKVVAI-----VLNYGLPELLADVGKQLSVSAWGRCFEQ------ 748
               |.:|.::...:|::  |.|..|:     :.|...|.:.:::|..|......|..::      
Mouse   631 ---PKVLRMVLLEWLSQ--LEKTFAMKDFPGISNTSSPTVKSNLGAHLLGETEKRVLDEESGEGR 690

  Fly   749 ---FVELQRGGRLVC 760
               .|..:.||::.|
Mouse   691 RVSLVTEEAGGQITC 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pNP_649810.1 WD40 <20..148 CDD:441893 33/130 (25%)
WD40 repeat 25..63 CDD:293791 10/38 (26%)
WD40 repeat 68..107 CDD:293791 12/39 (31%)
WD40 repeat 116..154 CDD:293791 9/42 (21%)
WD40 repeat 161..196 CDD:293791 15/34 (44%)
WD40 repeat 204..245 CDD:293791 23/40 (58%)
Hps5NP_001005247.2 WD40 repeat 37..75 CDD:293791 9/37 (24%)
WD40 <38..150 CDD:441893 31/111 (28%)
WD40 repeat 81..117 CDD:293791 11/35 (31%)
WD40 repeat 126..165 CDD:293791 9/38 (24%)
WD40 repeat 173..210 CDD:293791 16/36 (44%)
WD40 repeat 218..257 CDD:293791 22/38 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 461..514 11/60 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 560..579 8/39 (21%)

Return to query results.
Submit another query.