DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dhod and preA

DIOPT Version :10

Sequence 1:NP_477224.1 Gene:Dhod / 41022 FlyBaseID:FBgn0000447 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_416652.4 Gene:preA / 949037 ECOCYCID:EG11289 Length:411 Species:Escherichia coli


Alignment Length:348 Identity:82/348 - (23%)
Similarity:144/348 - (41%) Gaps:53/348 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 QNLHTSFFGRMLSNPIGIAAG-----FDKNAEAVD----GLQDLGFGFIEVGTVTPAAQEGNPKP 139
            ::|..:|.|....||..:::.     ::..|:|.|    |:.....||.....|:|....     
E. coli     4 KDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVSPRFDH----- 63

  Fly   140 RVFRLTEDKAIINRYGFNSDGHQAVLQRLRLLRK-KENF--NGVVGVNLGRNKTTMSPIADYVQG 201
               .:.||...|............:.:.|..||: ||::  ..::...:|.|:.....:|..||.
E. coli    64 ---LVKEDTGFIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGENEQQWEELARLVQE 125

  Fly   202 VRVFGPVADYLVINVSSP----NTKGLRDMQSKEKLRELLEQVNDTKSSLDKNKNVPILLKLSPD 262
            ..     ||.:..|.|.|    :..|....||.|.:.:....|.       :...:|:|.|::|:
E. coli   126 AG-----ADMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVK-------RGSTLPMLAKMTPN 178

  Fly   263 LSLDDMKDIVWVIKRKKSRVDGLIVSNTTVSRENIEKNKL--------AEETGGLSGPPLKARST 319
            :.  ||.::  .:..|:...||:...||..|..||:.|:.        .....|.||..:|..:.
E. coli   179 IG--DMCEV--ALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIAL 239

  Fly   320 EMIAQMY---QLTDGKIPIIGVGGVASGYDAYEKIEAGASYVQIYTALVYEGPALVEDIKAELSA 381
            ..|.||.   :|.|  .||.|:||:.:..||.|.:..||:.:|:.|.::..|..:|||:.:.||.
E. coli   240 RFIQQMRTHPELRD--FPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSH 302

  Fly   382 LITRLGHTNVADVVGTNSKFYLP 404
            .:...|..::.::||..:...:|
E. coli   303 YLADQGFDSLQEMVGLANNNIVP 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DhodNP_477224.1 DHOD_2_like 51..379 CDD:240089 76/321 (24%)
preANP_416652.4 PRK08318 4..408 CDD:236237 82/348 (24%)

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