DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dhod and Dhodh

DIOPT Version :10

Sequence 1:NP_477224.1 Gene:Dhod / 41022 FlyBaseID:FBgn0000447 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_001008553.1 Gene:Dhodh / 65156 RGDID:68352 Length:395 Species:Rattus norvegicus


Alignment Length:392 Identity:196/392 - (50%)
Similarity:261/392 - (66%) Gaps:13/392 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RLRSL-GIVTVGGAALVAGITAY---KNQDQLFRTFVMPAV-RLLPAEASHQLAVLACKYRLCPV 77
            |.|:| .::.:||..|:  .|:|   ...|..:..::||.: |||..|::|:|||......|.|.
  Rat     7 RKRALDAVIILGGGGLL--FTSYLTATGDDHFYAEYLMPGLQRLLDPESAHRLAVRVTSLGLLPR 69

  Fly    78 SQYHDDQNLHTSFFGRMLSNPIGIAAGFDKNAEAVDGLQDLGFGFIEVGTVTPAAQEGNPKPRVF 142
            :.:.|...|.....|....||:|||||||||.||||||..|||||:|||:|||..|||||:||||
  Rat    70 ATFQDSDMLEVKVLGHKFRNPVGIAAGFDKNGEAVDGLYKLGFGFVEVGSVTPQPQEGNPRPRVF 134

  Fly   143 RLTEDKAIINRYGFNSDGHQAVLQRLRLLRKKE---NFNGV-VGVNLGRNKTTMSPIADYVQGVR 203
            ||.||:|:||||||||.|...|..|||..::|:   ..:|: :|:|||:|||:....|||.:|||
  Rat   135 RLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQAQLTADGLPLGINLGKNKTSEDAAADYAEGVR 199

  Fly   204 VFGPVADYLVINVSSPNTKGLRDMQSKEKLRELLEQVNDTKSSLDKNKNVPILLKLSPDLSLDDM 268
            ..||:|||||:|||||||.|||.:|.|.:||.||.:|...:.:|...:...:|:|::|||:..|.
  Rat   200 TLGPLADYLVVNVSSPNTAGLRSLQGKTELRHLLSKVLQERDALKGTRKPAVLVKIAPDLTAQDK 264

  Fly   269 KDIVWVIKRKKSRVDGLIVSNTTVSRENIEKNKLAEETGGLSGPPLKARSTEMIAQMYQLTDGKI 333
            :||..|  .::..:|||||:||||||....:..|..|||||||.||:..||:.|.:||.||.|:|
  Rat   265 EDIASV--ARELGIDGLIVTNTTVSRPVGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRI 327

  Fly   334 PIIGVGGVASGYDAYEKIEAGASYVQIYTALVYEGPALVEDIKAELSALITRLGHTNVADVVGTN 398
            ||||||||:||.||.|||:||||.||:||||::.||.:|..:|.||.||:...|.|.|.|.:|.:
  Rat   328 PIIGVGGVSSGQDALEKIQAGASLVQLYTALIFLGPPVVVRVKRELEALLKERGFTTVTDAIGAD 392

  Fly   399 SK 400
            .:
  Rat   393 HR 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DhodNP_477224.1 DHOD_2_like 51..379 CDD:240089 178/332 (54%)
DhodhNP_001008553.1 DHOD_2_like 43..373 CDD:240089 177/331 (53%)

Return to query results.
Submit another query.