DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dhod and dhodh

DIOPT Version :9

Sequence 1:NP_477224.1 Gene:Dhod / 41022 FlyBaseID:FBgn0000447 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_001025575.1 Gene:dhodh / 594963 XenbaseID:XB-GENE-967864 Length:401 Species:Xenopus tropicalis


Alignment Length:388 Identity:183/388 - (47%)
Similarity:256/388 - (65%) Gaps:7/388 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RLRSLGIVTVGGAALVAGITAYKNQDQLFRTFVMPAV-RLLPAEASHQLAVLACKYRLCPVSQYH 81
            ||:...||..||..|.:.....|..:..:...:||.: ||:..|.:|.|:|......|.|:.::|
 Frog     9 RLKDALIVLGGGGLLFSSFLTIKGDEHFYAQCLMPIMQRLVNPELAHILSVKCVSLGLVPLCKHH 73

  Fly    82 DDQNLHTSFFGRMLSNPIGIAAGFDKNAEAVDGLQDLGFGFIEVGTVTPAAQEGNPKPRVFRLTE 146
            :.:.|.....|....||:|:||||||:.||||||..:||||:|||::||..|:||||||||||.:
 Frog    74 NSERLEVKVLGHTFRNPVGLAAGFDKHGEAVDGLFKIGFGFVEVGSITPKPQDGNPKPRVFRLPQ 138

  Fly   147 DKAIINRYGFNSDGHQAVLQRLRLLRKKENF---NGV-VGVNLGRNKTTMSPIADYVQGVRVFGP 207
            |.|:||||||||.|.:.|.|||...|:|:..   .|: :|:|||:|||:....|||.||::..|.
 Frog   139 DGAVINRYGFNSHGVEVVRQRLLERREKQKMLTAAGMPLGINLGKNKTSEDAAADYTQGLQQLGS 203

  Fly   208 VADYLVINVSSPNTKGLRDMQSKEKLRELLEQVNDTKSSLDKNKNVPILLKLSPDLSLDDMKDIV 272
            :|||||||||||||.|||::|.:::||:||.:|..::::|..:....:|:|::||||:.|.:||.
 Frog   204 LADYLVINVSSPNTPGLRNLQGRDQLRKLLTEVVKSRNALQCDPKPALLVKIAPDLSMQDKEDIA 268

  Fly   273 WVIKRKKSRVDGLIVSNTTVSRENIEKNKLAEETGGLSGPPLKARSTEMIAQMYQLTDGKIPIIG 337
            .|:  .:..:||||:||||:||.:..::....|.|||||.||:..:||.:.:||.||.|||||||
 Frog   269 SVV--TEVGIDGLIISNTTISRPSSLQDPQKSEVGGLSGIPLRDLATETVREMYALTAGKIPIIG 331

  Fly   338 VGGVASGYDAYEKIEAGASYVQIYTALVYEGPALVEDIKAELSALITRLGHTNVADVVGTNSK 400
            ||||.||.||..||.||||.||:||||.|:||.:|..:..||..|:...|...|:|.||.:.:
 Frog   332 VGGVFSGLDALHKIRAGASLVQLYTALTYQGPPVVGKVTTELDQLLVEQGFACVSDAVGADHR 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DhodNP_477224.1 PRK05286 45..387 CDD:235388 170/346 (49%)
DHOD_2_like 51..379 CDD:240089 167/332 (50%)
dhodhNP_001025575.1 DHOD_2_like 43..373 CDD:240089 166/331 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 309 1.000 Domainoid score I1333
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1043
Inparanoid 1 1.050 344 1.000 Inparanoid score I2277
OMA 1 1.010 - - QHG56580
OrthoDB 1 1.010 - - D1194348at2759
OrthoFinder 1 1.000 - - FOG0003942
OrthoInspector 1 1.000 - - oto103797
Panther 1 1.100 - - LDO PTHR48109
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2714
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

Return to query results.
Submit another query.