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Protein Alignment Dhod and Dhodh

DIOPT Version :9

Sequence 1:	NP_477224.1	Gene:	Dhod / 41022	FlyBaseID:	FBgn0000447	Length:	405	Species:	Drosophila melanogaster
Sequence 2:	NP_064430.1	Gene:	Dhodh / 56749	MGIID:	1928378	Length:	395	Species:	Mus musculus

Alignment Length:	390	Identity:	195/390 - (50%)
Similarity:	258/390 - (66%)	Gaps:	9/390 - (2%)

- Green bases have known domain annotations that are detailed below.

  Fly    18 RLRSL--GIVTVGGAALVAGITAYKNQDQLFRTFVMPAV-RLLPAEASHQLAVLACKYRLCPVSQ 79
            |.|:|  .|:..||..|..........|..:..::|||: |||..|::|:|||......|.|.:.
Mouse     7 RKRALDAAIILGGGGLLFTSYLTATGDDHFYAEYLMPALQRLLDPESAHRLAVRVISLGLLPRAT 71

  Fly    80 YHDDQNLHTSFFGRMLSNPIGIAAGFDKNAEAVDGLQDLGFGFIEVGTVTPAAQEGNPKPRVFRL 144
            :.|...|.....|....||:||||||||:.||||||..|||||:|||:|||..|||||:||||||
Mouse    72 FQDSNMLEVRVLGHKFRNPVGIAAGFDKHGEAVDGLYKLGFGFVEVGSVTPQPQEGNPRPRVFRL 136

  Fly   145 TEDKAIINRYGFNSDGHQAVLQRLRLLRKKE---NFNGV-VGVNLGRNKTTMSPIADYVQGVRVF 205
            .||:|:||||||||.|..||..|||..::|:   ..:|: :|:|||:|||::...||||:|||:.
Mouse   137 PEDQAVINRYGFNSHGLSAVEHRLRARQQKQTQLTTDGLPLGINLGKNKTSVDAAADYVEGVRIL 201

  Fly   206 GPVADYLVINVSSPNTKGLRDMQSKEKLRELLEQVNDTKSSLDKNKNVPILLKLSPDLSLDDMKD 270
            ||:|||||:|||||||.|||.:|.|.:||.||.:|...:.:|...:...:|:|::|||:..|.:|
Mouse   202 GPLADYLVVNVSSPNTAGLRSLQGKTELRRLLSKVLQERDALKGPQKPAVLVKIAPDLTAQDKED 266

  Fly   271 IVWVIKRKKSRVDGLIVSNTTVSRENIEKNKLAEETGGLSGPPLKARSTEMIAQMYQLTDGKIPI 335
            |..|  .::..:||||::||||||....:..|..|||||||.||:..||:.|.:||.||.|.|||
Mouse   267 IASV--ARELGIDGLIITNTTVSRPVGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGTIPI 329

  Fly   336 IGVGGVASGYDAYEKIEAGASYVQIYTALVYEGPALVEDIKAELSALITRLGHTNVADVVGTNSK 400
            ||||||:||.||.|||:||||.||:||||.:.||.:|..:|.||.||:...|...|.|.:|.:.:
Mouse   330 IGVGGVSSGQDALEKIQAGASLVQLYTALTFLGPPVVARVKRELEALLKERGFNTVTDAIGVDHR 394

Fly 401 400
Mouse 395 394

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.