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Protein Alignment Dhod and dpydb

DIOPT Version :9

Sequence 1:	NP_477224.1	Gene:	Dhod / 41022	FlyBaseID:	FBgn0000447	Length:	405	Species:	Drosophila melanogaster
Sequence 2:	NP_998058.1	Gene:	dpydb / 405829	ZFINID:	ZDB-GENE-040426-2459	Length:	1022	Species:	Danio rerio

Alignment Length:	346	Identity:	74/346 - (21%)
Similarity:	135/346 - (39%)	Gaps:	80/346 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly    82 DDQNLHTSFFGRMLSNPIGIA-AGFDKNAEAVDGLQDLGFGF-------IEVGTVTPAAQEGNPK 138
            |..::.....|....||.|:| |....:|..:....:.|:||       ::...||      |..
Zfish   529 DTVDISVEMCGIKFPNPFGLASAPPTTSAAMIRRAFEQGWGFALTKTFGLDKDLVT------NVS 587

  Fly   139 PRVFRLTEDKAIINRYGFNSDGH-----QAVLQRLRLLRKK-----------------ENFNGVV 181
            ||:.|.|            :.||     |.....:.|:.:|                 :|.. :.
Zfish   588 PRIVRGT------------TSGHIFGPGQGSFLNIELISEKTAAYWCKSVAELKADFPKNII-IA 639

  Fly   182 GVNLGRNKTTMSPIADYVQGVRVFGPVADYLVINVSSPNTKGLRDM-----QSKEKLRELLEQVN 241
            .:....|:...:.:|...|..:     ||.|.:|:|.|:..|.|.|     |..|.:|.:...|.
Zfish   640 SIMCSYNQADWTELAKMAQESQ-----ADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVR 699

  Fly   242 DTKSSLDKNKNVPILLKLSPDLSLDDMKDIVWVIKRKKSRVDGLIVSNTTVSRENIEKN------ 300
                   |..::|...||:|:::  ::.||  .....:...||:..:||......::.:
Zfish   700 -------KATSIPFFAKLTPNVT--NIVDI--ATAAYEGGADGVTATNTVSGLMALKADATPWPG 753

  Fly   301 --KLAEET-GGLSGPPLKARSTEMIAQMYQLTDGKIPIIGVGGVASGYDAYEKIEAGASYVQIYT 362
              :.|..| ||:||..::..:...::.:.:...| .||:..||:.|.....:.:.||||.:|:.:
Zfish   754 IGRGARTTYGGVSGNAIRPIALRAVSAIARALPG-FPILATGGIDSAESGLQFLHAGASVLQVCS 817

  Fly   363 ALVYEGPALVEDIKAELSALI 383
            |:..:...::||....|.||:
Zfish   818 AVQNQDFTVIEDYCLGLKALL 838

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.