DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dhod and ura3

DIOPT Version :9

Sequence 1:NP_477224.1 Gene:Dhod / 41022 FlyBaseID:FBgn0000447 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_593317.1 Gene:ura3 / 2542781 PomBaseID:SPAC57A10.12c Length:443 Species:Schizosaccharomyces pombe


Alignment Length:421 Identity:169/421 - (40%)
Similarity:240/421 - (57%) Gaps:58/421 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LRSLGIVTVGGAALVAGITAYKNQD-----------QLFRTFVMPAVRLLPAEASHQLAVLACKY 72
            ||...:::|.| :..||:..|...|           .||..|..|       |.||::|:||..:
pombe    35 LRHWKLLSVIG-SFTAGVAIYDMSDVRSFIHGRIEMPLFHAFTTP-------EFSHRVAILAASW 91

  Fly    73 RLCPVSQYHDDQNLHTSFFGRMLSNPIGIAAGFDKNAEAVDGLQDLGFGFIEVGTVTPAAQEGNP 137
            .:.|..:..||.:|....:|:...||||:||||||.|:|:.||.:.||.::|:|:|||..|.|||
pombe    92 GITPKDRVADDPSLAVEVWGKKFCNPIGLAAGFDKQADAISGLLNFGFSYLEIGSVTPKPQPGNP 156

  Fly   138 KPRVFRLTEDKAIINRYGFNSDGHQAVLQRLRLLRKK----------ENF--------------- 177
            |||.|||..|.::||||||||.||.|:|.:::...:|          :.|               
pombe   157 KPRYFRLKPDLSVINRYGFNSIGHDAILAKIQKRVRKYIAKTSPQLLKQFDANPASCTDPAVLGV 221

  Fly   178 ------NGVVGVNLGRNKTTMSPIADYVQGVRVFGPVADYLVINVSSPNTKGLRDMQSKEKLREL 236
                  |..:|:|||:||.. :.|.|||:|||.||..||.||||||||||.|||::|.|..|..|
pombe   222 PRSLIPNKFLGINLGKNKNG-NEIEDYVEGVRTFGNFADILVINVSSPNTPGLRNLQKKSALSTL 285

  Fly   237 LEQVNDTKSSLDKNKNVPILLKLSPDLSLDDMKDIVWVIKRKKSRVDGLIVSNTTVSR-ENIEKN 300
            |..|...::.|: :.:.|:|:|::|||:.:::.||..|:  ||.::||:||.||||.| :.::..
pombe   286 LTAVVSERNKLN-SPHPPVLVKIAPDLNEEELTDIADVL--KKCKIDGVIVGNTTVQRPKTLKST 347

  Fly   301 KLAEETGGLSGPPLKARSTEMIAQMYQLTDGKIPIIGVGGVASGYDAYEKIEAGASYVQIYTALV 365
            ...||||||||||||..:...:..:.:.....|||||.||::||.||.|...|||:.||:||||.
pombe   348 SHVEETGGLSGPPLKPIALNTLRTLRKHLSSDIPIIGCGGISSGKDAIEYARAGATMVQVYTALG 412

  Fly   366 YEGPALVEDIKAELSALITRLGHTNVADVVG 396
            |:||.:...||.|   ::..|......|::|
pombe   413 YDGPVIAHKIKQE---ILAELKGKRWVDIIG 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DhodNP_477224.1 PRK05286 45..387 CDD:235388 158/373 (42%)
DHOD_2_like 51..379 CDD:240089 154/359 (43%)
ura3NP_593317.1 PLN02826 42..431 CDD:178421 164/403 (41%)
DHOD_2_like 69..426 CDD:240089 158/370 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 260 1.000 Domainoid score I373
eggNOG 1 0.900 - - E1_COG0167
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1043
Inparanoid 1 1.050 281 1.000 Inparanoid score I670
OMA 1 1.010 - - QHG56580
OrthoFinder 1 1.000 - - FOG0003942
OrthoInspector 1 1.000 - - oto101254
orthoMCL 1 0.900 - - OOG6_101797
Panther 1 1.100 - - LDO PTHR48109
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2249
SonicParanoid 1 1.000 - - X2714
TreeFam 1 0.960 - -
1413.860

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