DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mkk4 and map2k6

DIOPT Version :9

Sequence 1:NP_001163551.1 Gene:Mkk4 / 41020 FlyBaseID:FBgn0024326 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001005653.1 Gene:map2k6 / 448132 XenbaseID:XB-GENE-944183 Length:335 Species:Xenopus tropicalis


Alignment Length:346 Identity:173/346 - (50%)
Similarity:227/346 - (65%) Gaps:27/346 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 GAQQPQQT--PPVASSQVPPVPAASSSSAADRHRERIRQQACGKLQFGEGGANTHTFTSDDLEDE 125
            |.:.|::.  .|..||..||              ..:..:||  :..||   ......:||||..
 Frog    12 GLKIPKEAFDQPQVSSPTPP--------------RDLDSKAC--ILIGE---KNFEVKADDLEPI 57

  Fly   126 GEIGRGAFGAVNKMTFKKLDKVMAVKRIRSTVDEKEQKQLLMDLEVVMKSNECIYIVQFYGALFK 190
            .|:||||:|.|.||.....:::|||||||:||:.:|||:|||||::.|::.:|.:.|.||||||:
 Frog    58 EELGRGAYGVVEKMRHVPSEQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCHFTVTFYGALFR 122

  Fly   191 EGDCWICMELMDTSLDKFYKYIYEKQQRHIPESILAKITVATVNALNYLKEELKIIHRDVKPSNI 255
            |||.||||||||||||||||.:.:|... |||.||.||.|:.|.||.:|..:|.:|||||||||:
 Frog   123 EGDVWICMELMDTSLDKFYKNVIDKGLT-IPEDILGKIAVSIVRALEHLHSKLSVIHRDVKPSNV 186

  Fly   256 LLHRRGDIKLCDFGISGQLVDSIAKTKDAGCRPYMAPERIDPE-RAKGYDVRSDVWSLGITLMEV 319
            |:::.|.:|:|||||||.||||:|||.||||:||||||||:|| ..|||.|:||:|||||||:|:
 Frog   187 LINKEGQVKMCDFGISGYLVDSVAKTMDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITLIEL 251

  Fly   320 ATGNFPYRKWDSVFEQLCQVVQGEPPRLLTSYNGMEFSKEFVDFVNTCLIKKESDRPKYSRLLEM 384
            |...|||..|.:.|:||.|||:...|:|...    :||.|||||.:.||.|...:||.|..|::.
 Frog   252 AILRFPYDSWGTPFQQLKQVVEEPSPQLPAD----KFSAEFVDFTSKCLKKNSKERPTYPELMQH 312

  Fly   385 PFIRRGETSHTDVAVYVADIL 405
            .|....|:.:||||.:|..||
 Frog   313 HFFVLHESKNTDVASFVKRIL 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mkk4NP_001163551.1 PKc_MKK4 115..405 CDD:270790 160/290 (55%)
S_TKc 123..387 CDD:214567 150/264 (57%)
map2k6NP_001005653.1 PKc_MKK3_6 52..334 CDD:173729 162/287 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D470057at33208
OrthoFinder 1 1.000 - - FOG0001217
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2221
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.040

Return to query results.
Submit another query.