DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mkk4 and sek-5

DIOPT Version :9

Sequence 1:NP_001163551.1 Gene:Mkk4 / 41020 FlyBaseID:FBgn0024326 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_508916.3 Gene:sek-5 / 185267 WormBaseID:WBGene00018034 Length:360 Species:Caenorhabditis elegans


Alignment Length:363 Identity:116/363 - (31%)
Similarity:173/363 - (47%) Gaps:50/363 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 AQQPQQTPPVASSQVPPVPAASSSSAADRHRERIRQQACGKLQFGEGGANTHTFTS-------DD 121
            :|.|.:..|.....:||:            ||.|.:..       :.||..:...|       ::
 Worm     2 SQPPGRRMPRPKLDLPPL------------RETIPEVL-------KNGALGYICVSGRILSVPEN 47

  Fly   122 LEDEGE-IGRG-AFGAVNKMTFKKLDKVMAVK----RIRSTVDEKEQKQL----LMDLEVVMKSN 176
            |...|| ||.| ...||.::.:.  .|::|.|    |:...||:....:|    |.::.|:....
 Worm    48 LLYGGERIGNGEGQSAVYRLIYN--GKLIARKDVAVRLPKGVDQDSTNKLMAKKLREVNVINGCA 110

  Fly   177 ECIYIVQFYG-ALFKEGDC---WICMELMDTSLDKFYKYIYEKQQRHIPESILAKITVATVNALN 237
            .|.:||.|:| .:.|..||   .|.||.|..|. ...|....||...|||.::.:|..:.::|:.
 Worm   111 PCPFIVHFFGYYVHKYRDCVKIHIFMEEMALSA-SVLKTEALKQGGAIPEFVIGRIVCSVIHAMW 174

  Fly   238 YLKEELKIIHRDVKPSNILLHRRGDIKLCDFGISGQLVDSIAKTKDAGCRPYMAPERI--DPERA 300
            :||:.|:|||||:||.|||:...|.:|:|||||.|.|.:||| ..|.||:.|.|||.:  ....:
 Worm   175 FLKDRLQIIHRDIKPGNILIDYDGRVKICDFGICGILENSIA-VSDTGCQQYTAPEILVKGVSNS 238

  Fly   301 KGYDVRSDVWSLGITLMEVATGNFPYRKWDSVFEQLCQVVQGEPPRLLTSYNGMEFSKEFVDFVN 365
            .||.::||:||||||:.|:||..:||....|.|..|..:|....|.|...    .:|...|:||:
 Worm   239 PGYSIKSDIWSLGITIFELATLRYPYPVGFSEFTLLSAIVTTPAPYLERG----TYSDSLVEFVS 299

  Fly   366 TCLIKKESDRPKYSRLLEMPFIRRGETSHTDVAVYVAD 403
            ..|..||:|||....:.::.|....:|....:...|.|
 Worm   300 KLLQIKEADRPSIVAVKDLQFFLNNDTPFLCIGTGVGD 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mkk4NP_001163551.1 PKc_MKK4 115..405 CDD:270790 106/312 (34%)
S_TKc 123..387 CDD:214567 100/279 (36%)
sek-5NP_508916.3 PKc_like 58..311 CDD:389743 95/260 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1132
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D688282at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.830

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