DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mkk4 and stk39

DIOPT Version :9

Sequence 1:NP_001163551.1 Gene:Mkk4 / 41020 FlyBaseID:FBgn0024326 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_017953089.2 Gene:stk39 / 100488948 XenbaseID:XB-GENE-1012528 Length:609 Species:Xenopus tropicalis


Alignment Length:397 Identity:112/397 - (28%)
Similarity:176/397 - (44%) Gaps:84/397 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SSRSRNPPDQLSLNNLSIRHPPSSTSSTSSGSTSSGSSSSSQHNHVTRCFGAQQPQQTPPVASSQ 77
            ||.|.|.|.:.|:                  ||:|.|.|:.          .||.|...|:.|  
 Frog    76 SSHSSNKPRRRSI------------------STTSLSMSAE----------PQQQQSDSPLHS-- 110

  Fly    78 VPPVPAASSSSAADRHRERIRQQACGKLQFGEGGANTHTFTSDDLEDEGEIGRGAFGAVNKMTFK 142
             |..|||          :.|....|                .|..|.:..||.||...|.....|
 Frog   111 -PQPPAA----------QPIGWPIC----------------RDSYELQEVIGSGATAVVQAALCK 148

  Fly   143 KLDKVMAVKRIRSTVDEKEQKQLLMDLEVVMKSNECIY--IVQFYGALFKEGDCWICMELMD--T 203
            ...:.:|:|||.....:....:||.:::.:   ::|.:  ||.:|.:...:.:.|:.|:|:.  :
 Frog   149 PRQERVAIKRINLEKCQTSMDELLKEIQAM---SQCSHPNIVTYYTSFVVKEELWLVMKLLSGGS 210

  Fly   204 SLDKFYKYIY---EKQQRHIPESILAKITVATVNALNYLKEELKIIHRDVKPSNILLHRRGDIKL 265
            .|| ..|::.   |.:...:.|||:|.|....:..|:||....: ||||:|..||||...|.:::
 Frog   211 MLD-IIKHVVGRGEHKNGVLEESIIATILKEVLEGLDYLHRNGQ-IHRDLKAGNILLGEDGSVQI 273

  Fly   266 CDFGISGQLV-------DSIAKTKDAGCRPYMAPERIDPERAKGYDVRSDVWSLGITLMEVATGN 323
            .|||:|..|.       :.:.|| ..|...:||||.:  |:.:|||.::|:||.|||.:|:|||.
 Frog   274 ADFGVSSFLATGGDVTRNKVRKT-FVGTPCWMAPEVM--EQVRGYDFKADMWSFGITAIELATGA 335

  Fly   324 FPYRKWDSVFEQLCQVVQGEPPRLLTSYNGME----FSKEFVDFVNTCLIKKESDRPKYSRLLEM 384
            .||.|:..: :.|...:|.:||.|.|.....|    :.|.|...::.||.|..|.||..:.||:.
 Frog   336 APYHKYPPM-KVLMLTLQNDPPTLETGVEDKEMMRKYGKSFRKLISLCLQKDPSKRPTAAELLKC 399

  Fly   385 PFIRRGE 391
            .|.::.:
 Frog   400 KFFQKSK 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mkk4NP_001163551.1 PKc_MKK4 115..405 CDD:270790 90/295 (31%)
S_TKc 123..387 CDD:214567 88/281 (31%)
stk39XP_017953089.2 STKc_OSR1_SPAK 126..402 CDD:270787 89/284 (31%)
OSR1_C 516..573 CDD:403428
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D688282at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.