DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp313b1 and Cyp4f18

DIOPT Version :9

Sequence 1:NP_001287239.1 Gene:Cyp313b1 / 41019 FlyBaseID:FBgn0037601 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001028858.2 Gene:Cyp4f18 / 290623 RGDID:1305261 Length:524 Species:Rattus norvegicus


Alignment Length:521 Identity:150/521 - (28%)
Similarity:243/521 - (46%) Gaps:50/521 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SGWLLLAWL-------YFLWSRRRYYKVAWQLR----GPI-GWPLIGMGLQMMNPETFLQYMDGL 60
            |.||||..:       |.|......::.:.:||    .|. .|....:|| :.:.|..|.|:..|
  Rat    17 SPWLLLLLVGASCLLAYILPQVYAVFENSRRLRRFPQPPTRNWLFGHLGL-IQSSEEGLLYIQSL 80

  Fly    61 SRQFKAPFISWMGT-SCFLYINDPHSVEQILNSTHCTNKGD--FYRFMSSAIGDGLFTSSSPRWH 122
            ||.|:.....|:|. ...:.|..|..::.::.:.......|  ||||:...:||||..|:..:|.
  Rat    81 SRTFRDVCCWWVGPWHPVIRIFHPAFIKPVILAPASVAPKDRVFYRFLKPWLGDGLLLSTGDKWS 145

  Fly   123 KHRRLINPAFGRQILSNFLPIFNAEAEVLLQKLELEGVQHGKRLEIYQILKKIVLEAACQTTMGK 187
            :||.::.|||...||..::.|||....::..|.:....|...||::::.:..:.|::..:.....
  Rat   146 RHRHMLTPAFHFNILKPYVKIFNDSTNIMHAKWQRLASQGSARLDMFEHISLMTLDSLQKCVFSF 210

  Fly   188 KMNFQHDGSLCIFKAYNGLTEVCVKRMLSPWLYPDLIYR--RSGL-FRLQQKVVGILFGFIEQLL 249
            ..|.|...|..| .|...|:.:..:|..|..||.||.|.  |.|: ||   |...::..|.:.::
  Rat   211 DSNCQEKPSEYI-TAILELSALVARRHQSLLLYVDLFYHLTRDGMRFR---KACRLVHDFTDAVI 271

  Fly   250 EPIVSVVAANSNPDQQRSE-MEMRGKSKAI-FIEQV----REHVERGQLSWQDVRDEANVTIAAT 308
            ..     ...:.|||...: ::.:.|:|.: ||:.:    .||.|  .||.:|:|.||:..:...
  Rat   272 RE-----RRRTLPDQGGDDALKAKAKAKTLDFIDVLLLSKDEHGE--ALSDEDIRAEADTFMFGG 329

  Fly   309 FETTSTALYFTILCLAMHPCYQEKLH---KELVTELPPSGDINLEQLQRLEYTEMVINEAMRLFA 370
            .:||::.|.:.:..||.||.|||:..   :||:.:..|. :|..:.|.:|.:..|.|.|::||..
  Rat   330 HDTTASGLSWILYNLAKHPEYQERCRQEVRELLRDREPE-EIEWDDLAQLPFLTMCIKESLRLHP 393

  Fly   371 PVPMVLRSADQDIQLKRGDGEFLIPRGTQIGIDIYNMQRDERVWGPLSRTYNPDAHFGLDSPQ-R 434
            |...:.|...|||.|.  ||. :||:|....|.|:....:..|| |....||| ..|..|:.: |
  Rat   394 PATAISRCCTQDIMLP--DGR-VIPKGVICRISIFGTHHNPAVW-PDPEVYNP-FRFDADNGEGR 453

  Fly   435 HAFAFVPFTKGLRMCIGYRYAQMLMKLLLARIFRSYRISTE----ARLEELLVKGNISLKLKDYP 495
            ...||:||:.|.|.|||..:|...||:.||.....:|:..:    .|..||:::....|.|:..|
  Rat   454 SPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRVLPDDKEPRRKPELILRAEGGLWLRVEP 518

  Fly   496 L 496
            |
  Rat   519 L 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313b1NP_001287239.1 p450 33..474 CDD:299894 135/461 (29%)
Cyp4f18NP_001028858.2 CYP4F 74..515 CDD:410772 133/457 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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