DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp313b1 and Cyp4v3

DIOPT Version :9

Sequence 1:NP_001287239.1 Gene:Cyp313b1 / 41019 FlyBaseID:FBgn0037601 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001129072.1 Gene:Cyp4v3 / 266761 RGDID:708530 Length:525 Species:Rattus norvegicus


Alignment Length:531 Identity:153/531 - (28%)
Similarity:254/531 - (47%) Gaps:53/531 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSGWLLLAW-----------------LYFLWSRRRYYKVAWQLRGPI-----GWPLIGMGLQMM- 48
            |||..||.|                 |..|.|    |...||...||     .:||:|..|.|. 
  Rat     8 LSGQKLLLWGAASAVSVAGATVLLNILQMLVS----YARKWQQMRPIPSVARAYPLVGHALFMKP 68

  Fly    49 NPETFLQYMDGLSRQFK-APFIS-WMGTSCFLYINDPHSVEQILNSTHCTNKGDFYRFMSSAIGD 111
            |...|.|.:...:.:|: .|.|. |:|....:.:....:||.||.|:...:|...|:|:...:|.
  Rat    69 NNTEFFQQIIQYTEEFRHLPIIKLWIGPVPLVALYKAENVEVILTSSKQIDKSFMYKFLQPWLGL 133

  Fly   112 GLFTSSSPRWHKHRRLINPAFGRQILSNFLPIFNAEAEVLLQKLELEGVQHGKRLEIYQILKKIV 176
            ||.||:..:|...|:::.|:|...||.:||.:.|.:|.:|:.|||....|  :....:..:....
  Rat   134 GLLTSTGSKWRARRKMLTPSFHFTILEDFLDVMNEQANILVNKLEKHVNQ--EAFNCFFPITLCA 196

  Fly   177 LEAACQTTMGKKMNFQHDGSLCIFKAYNGLTEVCVKRMLSPWLYPDLIYRRSGLFRLQQKVVGIL 241
            |:..|:|.|||.:..|.:|.....:....::::..:||..||.:.||.|......|..:|.:..|
  Rat   197 LDIICETAMGKNIGAQSNGDSEYVRTVYRMSDMIYRRMKMPWFWFDLWYLMFKEGRDHKKGLKSL 261

  Fly   242 FGFIEQLLEPIVSVVAANSNPDQQ------RSEMEMRGKSKAIFIE---QVREHVERGQLSWQDV 297
            ..|...::...|     |:...:|      |..:..:.|.|| |::   .|.:. |..:||.:|:
  Rat   262 HTFTNNVIAERV-----NARKAEQDCIGAGRGPLPSKTKRKA-FLDLLLSVTDE-EGNKLSHEDI 319

  Fly   298 RDEANVTIAATFETTSTALYFTILCLAMHPCYQEKLHKELVTELPPS-GDINLEQLQRLEYTEMV 361
            |:|.:..:....:||:.|:.:::..|..:|..|.|:.|||......| ..:.||.|::|:|.:.|
  Rat   320 REEVDTFMFEGHDTTAAAINWSLYLLGSNPEVQRKVDKELDDVFGRSHRPVTLEDLKKLKYLDCV 384

  Fly   362 INEAMRLFAPVPMVLRSADQDIQLKRGDGEFLIPRGTQIGIDIYNMQRDERVWGPLSRTYNPDAH 426
            |.|.:|:|..||:..||..:|.::    ..:.|.:||:..|..|.:.||.|.: |....:.|:..
  Rat   385 IKETLRVFPSVPLFARSLSEDCEV----AGYKISKGTEAVIIPYALHRDPRYF-PDPEEFQPERF 444

  Fly   427 FGLDSPQRHAFAFVPFTKGLRMCIGYRYAQMLMKLLLARIFRSYRISTEARLEELLVKGNISLKL 491
            |..:|..||.:|:|||:.|.|.|||.::|.|..|.:||.|.|.:.|.:..:.|||.:.|::.|:.
  Rat   445 FPENSQGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILACILREFWIESNQKREELGLAGDLILRP 509

  Fly   492 KDYPLCRVERR 502
            .:....:::||
  Rat   510 NNGIWIKLKRR 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313b1NP_001287239.1 p450 33..474 CDD:299894 134/458 (29%)
Cyp4v3NP_001129072.1 CYP4V 76..515 CDD:410773 129/452 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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