DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp313b1 and cyp-29A2

DIOPT Version :9

Sequence 1:NP_001287239.1 Gene:Cyp313b1 / 41019 FlyBaseID:FBgn0037601 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_505847.1 Gene:cyp-29A2 / 179550 WormBaseID:WBGene00011830 Length:503 Species:Caenorhabditis elegans


Alignment Length:519 Identity:133/519 - (25%)
Similarity:238/519 - (45%) Gaps:69/519 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SIILSGWLLLAWLYFLWSRRRYYKVAWQLRGPIGWPLIGMGLQMMNPETFLQYMDGLSRQFKAPF 68
            :|||:  .|..|:..|...:|:::...:|.||...|:.|....::..:|         ....:.|
 Worm    10 AIILA--YLATWIPTLLKYKRHWQYGSKLPGPPAHPIFGNLGPIVGKKT---------EDLPSVF 63

  Fly    69 ISWMGTSCFLYINDPHSVEQ-------------------ILNSTHCTNKGDFYRFMSSAIGDGLF 114
            |:|....    .:..|||.:                   |::||..|||||.|||....:|.||.
 Worm    64 INWAAEQ----RDQGHSVMRVMILGKVYAWPLNGKAAAAIIDSTTETNKGDDYRFFDPWLGGGLL 124

  Fly   115 TSS-SPRWHKHRRLINPAFGRQILSNFLPIFNAEAEVLLQKLELEGVQHGKRLEIYQILKKIVLE 178
            ... ..||..||:::.|||....|..:..:||.|:::|:..|. :....|:.::|:..:|:..|:
 Worm   125 LEGYGERWKSHRKMLTPAFHFAKLGGYFEVFNNESKILIDLLS-DFSASGETVDIFPYVKRCALD 188

  Fly   179 AACQTTMGKKMNFQ--HDGSLCIFKAYNGLTEVCVKRMLSPWLYPDLIYRRSGLFRLQQKVVGIL 241
            ...:|.||.|::.|  ||..  ..:|..|..::.|....:|.|....|:..:|........:..|
 Worm   189 IISETAMGIKIDAQINHDHK--YVQAVEGYNKIGVLVSFNPHLKNQFIFWATGYKAQYDDYLSTL 251

  Fly   242 FGFIEQLLEPIVSVVAANSNPDQQRSEMEMRGKSKAIFIEQVREHVERGQLSWQDVRDEANVTIA 306
                :.:.|.::....|..:..:...|...|..:   |::.:....|..||:.:|:|.|.:..:.
 Worm   252 ----KSMTEKVIKERRAAHDSGEVEKETSKRMMN---FLDLMLSMEESNQLTSEDIRQEVDTFMF 309

  Fly   307 ATFETTSTALYFTILCLAMHPCYQEKLHKELVTEL--PPSGDINLEQLQRLEYTEMVINEAMRLF 369
            |..:||:::..:....||.:|..|||::||::...  .|:.||.||.:..|.|.::|:.|:.|:.
 Worm   310 AGHDTTTSSTSWACWNLAHNPNVQEKVYKEMIEVFGDDPNTDITLENVNNLNYLDIVLKESKRII 374

  Fly   370 APVPMVLRSADQDIQLKRGDGEFLIPRGTQIGIDIYNMQRDERVW-GPLSRTYNPDAHFGLDSPQ 433
            ||||.:.|....|:::   || :::|.|..:.|....:..:..|: .|..  :|||.....:..:
 Worm   375 APVPALQRKLTNDLEI---DG-YIVPAGGNVTISPMVLHSNHHVFKNPTE--FNPDRFLPDEVSK 433

  Fly   434 RHAFAFVPFTKGLRMCIGYRYAQMLMKLLLARIFRSYRISTEARLEELLVKGNISLKLKDYPLC 497
            ||.:.|:||..|.|.|||.::||:..|::::.|.|:::|..             :||..|...|
 Worm   434 RHPYDFMPFLAGPRNCIGQKFAQLNEKVMISHIVRNFKIEP-------------TLKYNDTKPC 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313b1NP_001287239.1 p450 33..474 CDD:299894 121/465 (26%)
cyp-29A2NP_505847.1 p450 37..495 CDD:278495 125/490 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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