DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 5-HT2B and TAAR8

DIOPT Version :10

Sequence 1:NP_001262373.1 Gene:5-HT2B / 41017 FlyBaseID:FBgn0261929 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_444508.1 Gene:TAAR8 / 83551 HGNCID:14964 Length:342 Species:Homo sapiens


Alignment Length:213 Identity:60/213 - (28%)
Similarity:103/213 - (48%) Gaps:40/213 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 FDANNYWALLALVLVLGTAAGNILVCLAIAWERRLQNVTNYFLMSLAITDLMVAVLVMPLGILTL 134
            :.|.::.:|||:.       ||:||..::...::|.:.||:.:.|||..|.:|.|.||...::..
Human    35 YTAFSFGSLLAVF-------GNLLVMTSVLHFKQLHSPTNFLIASLACADFLVGVTVMLFSMVRT 92

  Fly   135 VKGYFPLGSEHCLTWICLDVLFCTASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVFVWL 199
            |:..:..|::.|....|.||.||.:|::|||.|.:|||:.:..|:.:....|        |.|..
Human    93 VESCWYFGAKFCTLHSCCDVAFCYSSVLHLCFICIDRYIVVTDPLVYATKFT--------VSVSG 149

  Fly   200 LSIAMSLPLSLMYSKNHASVLVNGTCQIPDPVYKLVGSIVC-------------------FYIPL 245
            :.|::|..|.|.||   .:|...|...  |.:.:||.::.|                   |:||.
Human   150 ICISVSWILPLTYS---GAVFYTGVND--DGLEELVSALNCVGGCQIIVSQGWVLIDFLLFFIPT 209

  Fly   246 GVMLLTYCLTVRLLARQR 263
            .||::.|. .:.|:|:|:
Human   210 LVMIILYS-KIFLIAKQQ 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT2BNP_001262373.1 7tmA_5-HT2_insect-like 74..>267 CDD:320433 59/209 (28%)
TM helix 1 75..101 CDD:320433 7/25 (28%)
TM helix 2 108..134 CDD:320433 10/25 (40%)
TM helix 3 146..176 CDD:320433 14/29 (48%)
TM helix 4 188..211 CDD:320433 5/22 (23%)
TM helix 5 229..258 CDD:320433 10/47 (21%)
7tm_GPCRs <799..893 CDD:475119
TM helix 6 818..840 CDD:410628
TM helix 7 854..879 CDD:410628
TAAR8NP_444508.1 7tmA_TAAR6_8_9 32..321 CDD:320439 60/213 (28%)
TM helix 1 33..59 CDD:320439 8/30 (27%)
TM helix 2 66..92 CDD:320439 10/25 (40%)
TM helix 3 104..134 CDD:320439 14/29 (48%)
TM helix 4 146..169 CDD:320439 8/25 (32%)
TM helix 5 193..222 CDD:320439 6/29 (21%)
TM helix 6 250..280 CDD:320439
TM helix 7 289..314 CDD:320439
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.