DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT2B and taar10b

DIOPT Version :10

Sequence 1:NP_001262373.1 Gene:5-HT2B / 41017 FlyBaseID:FBgn0261929 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_001076372.1 Gene:taar10b / 794579 ZFINID:ZDB-GENE-041014-67 Length:336 Species:Danio rerio


Alignment Length:238 Identity:70/238 - (29%)
Similarity:110/238 - (46%) Gaps:25/238 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 PFDANNYWALLALVLVLGTAAGNILVCLAIAWERRLQNVTNYFLMSLAITDLMVAVLVMPLGILT 133
            |.:...:..:|.....:.|..||:||.:.:...|:|...|||.::|||:.||:|..:|||..:|.
Zfish    33 PLETRIFLYILFSASSIITIIGNLLVIITVVHFRQLHTPTNYLILSLAVADLLVGGVVMPPSMLR 97

  Fly   134 LVKGYFPLGSEHCLTWICLDVLFCTASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVFVW 198
            .::..:.||...|.....|||..|||||::||.||:|||.::.:|.::....|.....:.|:..|
Zfish    98 SIETCWYLGDLFCKIHSSLDVTLCTASILNLCIISLDRYYAICHPFQYHSKMTSLATLVMIIICW 162

  Fly   199 LLSIAMSLPLSLM----------YSKNHASVLVNGTCQI-PDPVYKLVGSIVCFYIPLGVMLLTY 252
            .:|..:...:..|          |.:|   |..||.|.: ......:..|:.|||||..|||..|
Zfish   163 TVSAVLGFGMIFMELNILGVEDFYYEN---VDCNGRCLVFQSREVAVFMSLACFYIPAFVMLCVY 224

  Fly   253 CLTVRLLARQRQNL----------GGGQQTAAATPG-WASGWL 284
            ...:....||.|.:          |...:|.|...| :.:.|:
Zfish   225 LKILHEAQRQVQAIQSVNSELKKEGKATKTLAIIVGVFLTFWI 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT2BNP_001262373.1 7tmA_5-HT2_insect-like 74..>267 CDD:320433 64/213 (30%)
TM helix 1 75..101 CDD:320433 6/25 (24%)
TM helix 2 108..134 CDD:320433 13/25 (52%)
TM helix 3 146..176 CDD:320433 16/29 (55%)
TM helix 4 188..211 CDD:320433 3/22 (14%)
TM helix 5 229..258 CDD:320433 10/28 (36%)
7tm_GPCRs <799..893 CDD:475119
TM helix 6 818..840 CDD:410628
TM helix 7 854..879 CDD:410628
taar10bNP_001076372.1 7tmA_TAAR1 38..317 CDD:320438 69/233 (30%)
TM helix 1 39..65 CDD:320438 6/25 (24%)
TM helix 2 72..98 CDD:320438 13/25 (52%)
TM helix 3 110..140 CDD:320438 16/29 (55%)
TM helix 4 152..175 CDD:320438 3/22 (14%)
TM helix 5 201..230 CDD:320438 10/28 (36%)
TM helix 6 246..276 CDD:320438 5/22 (23%)
TM helix 7 285..310 CDD:320438
Blue background indicates that the domain is not in the aligned region.

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