DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT2B and 5-HT2B

DIOPT Version :10

Sequence 1:NP_001262373.1 Gene:5-HT2B / 41017 FlyBaseID:FBgn0261929 Length:947 Species:Drosophila melanogaster
Sequence 2:XP_061501050.1 Gene:5-HT2B / 5667641 VectorBaseID:AGAMI1_004218 Length:908 Species:Anopheles gambiae


Alignment Length:960 Identity:454/960 - (47%)
Similarity:541/960 - (56%) Gaps:230/960 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 HVARWNATGNATISATFEDV-----PFDA------------NNYWALLALVLVLGTAAGNILVCL 96
            ::.::|.|||...:.|..:.     ..||            :|||||||::||.|||||||||||
Mosquito    73 YMKQFNFTGNPIDNRTGAEAGLGPDRIDADDDEDDGSSLALHNYWALLAIILVFGTAAGNILVCL 137

  Fly    97 AIAWERRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVKGYFPLGSEHCLTWICLDVLFCTASI 161
            ||.||||||||||||||||||||||||:.||||||||||||:|||.||:||.|||||||||||||
Mosquito   138 AIVWERRLQNVTNYFLMSLAITDLMVALSVMPLGILTLVKGHFPLDSEYCLVWICLDVLFCTASI 202

  Fly   162 MHLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVFVWLLSIAMSLPLSLMYSKNHASVLVNGTCQ 226
            ||||||||||||||||||:||||||||||.|||.||||||||||||||||||||||||||:||||
Mosquito   203 MHLCTISVDRYLSLRYPMKFGRNKTRRRVVLKISFVWLLSIAMSLPLSLMYSKNHASVLVDGTCQ 267

  Fly   227 IPDPVYKLVGSIVCFYIPLGVMLLTYCLTVRLLARQRQNLGGGQQTAAATPGWASGWLGQAPALE 291
            |||||||||||||||||||.|||:||.|||||||:|.:||||    ..:..||:|||||||||.:
Mosquito   268 IPDPVYKLVGSIVCFYIPLCVMLITYTLTVRLLAQQSENLGG----VGSGGGWSSGWLGQAPAFD 328

  Fly   292 RRCTWRRLLK---PGPGNASSVLHAHSANSTDTDLSTLDNHELWLPDSSIKEPTPTTMTALHQFG 353
            ||.||:|::|   |...|.    |||||.||||:|||||||:|||.:|||.||:..||||:.:||
Mosquito   329 RRNTWKRIIKLSLPAAQNP----HAHSAASTDTELSTLDNHDLWLLESSIPEPSSITMTAMQRFG 389

  Fly   354 AEMLKLSRGLESVASSSTTGSPTKSEFSLSNHLQLQYPSSPQRYAATHQQSHHHNHQQHPAGVYH 418
            .||||||:||||||                                        .|....:|...
Mosquito   390 EEMLKLSQGLESVA----------------------------------------QHSDRNSGQNG 414

  Fly   419 QQASPKGRHGTTVLGLSTTTLGIERESTRNSLASSRMGGEQSDGTLSQLSQRLRAYKKRRRASSA 483
            ...||:...              |:||.|...|:::    .:...::.::.|.....|:||:|::
Mosquito   415 SSRSPEPSR--------------EKESFRKKPANAK----HAPTPVTMVTVRSPVPSKKRRSSTS 461

  Fly   484 VPGREKRAGHEDADEDVETPTSTLRRHKRHNSLPKNALYPRHTTVQESLDDDDDEEEESAQQ--- 545
            .....:.:|         ||.......||..||| :||.|       ...||.:.:|:..|.   
Mosquito   462 TWIARRNSG---------TPPPVRLVRKRFKSLP-HALPP-------PASDDIEVDEQFMQDVLY 509

  Fly   546 --KDQQTKSKICHSDTE-----LD---------------------PPQKAKQCH-IAGQNHQSDY 581
              :|::.:..:..|...     ||                     .|...:|.| :|..:..:..
Mosquito   510 ELRDREDRGSVHGSSARPGAAGLDGVPAAASRATSDRREGRDAGSNPAGPRQAHPLAAPSQTAAT 574

  Fly   582 LQLPSVCTCPYFGDRP--LQNCVKSAEVKIISSAFRVTTTTTAVSSSPSEMELLMCSSGNKKSLT 644
            |:||..|.||:||:..  .|..::.||:||:.                                 
Mosquito   575 LKLPPPCKCPFFGEGAPGRQQYLRPAEIKIVK--------------------------------- 606

  Fly   645 SSVSAGITGGPAGAAPATVGSTLSPHSAHNQGSSLTVQ-----SDGSGYLAAPGTPCPGRRKLSI 704
            :|...|..||.|....:.|.||:|..|    ||::|.|     |.....|.|.....|. ||.|.
Mosquito   607 TSTDFGPMGGAASNGDSLVYSTISISS----GSNVTTQPTRSISSSLSTLPASALASPS-RKGSA 666

  Fly   705 SKTASVVTWDSSRHRRRGSSFGGVRTSLLLTPTKTATTSNSSTPLRRSATLRSHQNMNYQGAGEC 769
            .|..||||||..||:||||||||.||||||||||   .|.||..||||..|| |..:...|.|..
Mosquito   667 PKGISVVTWDQRRHQRRGSSFGGARTSLLLTPTK---ASPSSVSLRRSINLR-HSALEGGGGGGG 727

  Fly   770 G--------GKTRTTTSSPCMLQRQ-------------------------------------QTV 789
            |        |..:..:||||::|.|                                     ..|
Mosquito   728 GSAGETMFRGAPKKNSSSPCLMQHQTGGGGGGGAVGGGNGTAVAMMAVAAASSTVPTLATTTMAV 792

  Fly   790 RSHHSRNSSVISRNSSRHGRIIRLEQKATKVLGVVFFTFVILWSPFFVLNLLPTVCAECEERISH 854
            |||||||||:|||||||||||||||||||||||||||||||||:|||||||||:||..||:.|..
Mosquito   793 RSHHSRNSSMISRNSSRHGRIIRLEQKATKVLGVVFFTFVILWAPFFVLNLLPSVCKHCEDNIDQ 857

  Fly   855 WVFDVVTWLGYASSMVNPIFYTIFNKVFRQAFKKVLLCRYS-STSAWRPS 903
            |||:.|||||||||:|||||||||||.||.||:|||||||. ....|:|:
Mosquito   858 WVFEFVTWLGYASSLVNPIFYTIFNKAFRDAFRKVLLCRYGLKARHWQPN 907

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT2BNP_001262373.1 7tmA_5-HT2_insect-like 74..>267 CDD:320433 172/192 (90%)
TM helix 1 75..101 CDD:320433 21/25 (84%)
TM helix 2 108..134 CDD:320433 23/25 (92%)
TM helix 3 146..176 CDD:320433 28/29 (97%)
TM helix 4 188..211 CDD:320433 20/22 (91%)
TM helix 5 229..258 CDD:320433 25/28 (89%)
7tm_GPCRs <799..893 CDD:475119 78/93 (84%)
TM helix 6 818..840 CDD:410628 20/21 (95%)
TM helix 7 854..879 CDD:410628 20/24 (83%)
5-HT2BXP_061501050.1 None

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