DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT2B and Oct-TyrR

DIOPT Version :9

Sequence 1:NP_001262373.1 Gene:5-HT2B / 41017 FlyBaseID:FBgn0261929 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_001163494.1 Gene:Oct-TyrR / 42452 FlyBaseID:FBgn0004514 Length:601 Species:Drosophila melanogaster


Alignment Length:901 Identity:185/901 - (20%)
Similarity:296/901 - (32%) Gaps:401/901 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AYNDSGGDDWSSSEHLVLWEEDETQRTTANATSRHNQLHVARWNATGNATISATFEDVPFDANNY 75
            |..||.|:...:.|.|             :|:....||.|..|.|...|.:              
  Fly    78 ADKDSAGECEGAVEEL-------------HASILGLQLAVPEWEALLTALV-------------- 115

  Fly    76 WALLALVLVLGTAAGNILVCLAIAWERRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVKGYFP 140
               |::::|| |..|||||.|::...:.|:.|.|:|::|||:.||.||:||:|..:...:.|.:.
  Fly   116 ---LSVIIVL-TIIGNILVILSVFTYKPLRIVQNFFIVSLAVADLTVALLVLPFNVAYSILGRWE 176

  Fly   141 LGSEHCLTWICLDVLFCTASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVFVWLLSIAMS 205
            .|...|..|:..|||.||:||::||.|::|||.::..|:.:.:.:|..||.|.|..|||||:.:|
  Fly   177 FGIHLCKLWLTCDVLCCTSSILNLCAIALDRYWAITDPINYAQKRTVGRVLLLISGVWLLSLLIS 241

  Fly   206 LPLSLMYSKNHASVLVNGT-CQIPDP----VYKLVGSIVCFYIPLGVMLLTYCLTVRLLARQRQN 265
            .| .|:...:......:.| |::...    :|..:||   |:|||.:|.:.| :.:.:..|:|  
  Fly   242 SP-PLIGWNDWPDEFTSATPCELTSQRGYVIYSSLGS---FFIPLAIMTIVY-IEIFVATRRR-- 299

  Fly   266 LGGGQQTAAATPGWASGWLGQAPALERRCTWRRL---------LKPGPGNASSVLHAHSANSTDT 321
                                    |..|....:|         |:| ..|:|.|..::|.:.:..
  Fly   300 ------------------------LRERARANKLNTIALKSTELEP-MANSSPVAASNSGSKSRL 339

  Fly   322 DLSTLDNHELWL---PDSSIKEPTPTTMTALHQFGAEMLKLSRGLESVASSSTTGSPTKSEFSLS 383
            ..|       ||   .|.:             ||...|::..:  ||::|.              
  Fly   340 LAS-------WLCCGRDRA-------------QFATPMIQNDQ--ESISSE-------------- 368

  Fly   384 NHLQLQYPSSPQRYAATHQQSHHHNHQQHPAGVYHQQASPKGRHGTTVLGLSTTTLGIERESTRN 448
                            |||.               |.:|..|.||                    
  Fly   369 ----------------THQP---------------QDSSKAGPHG-------------------- 382

  Fly   449 SLASSRMGGEQSDGTLSQLSQRLRAYKKRRRASSAVPGREKRAGHEDADEDVETPTSTLRRHKRH 513
                      .||   .|....:...||.|||                                 
  Fly   383 ----------NSD---PQQQHVVVLVKKSRRA--------------------------------- 401

  Fly   514 NSLPKNALYPRHTTVQESLDDDDDEEEESAQQKDQQTKSKICHSDTELDPPQKAKQCHIAGQNHQ 578
                                               :||..|.|..|.            .|:..|
  Fly   402 -----------------------------------KTKDSIKHGKTR------------GGRKSQ 419

  Fly   579 SDYLQLPSVCTCPYFGDRPLQNCVKSAEVKIISSAFRVTTTTTAVSSSPSEMELLMCSSGNKKSL 643
            |.       .||...|                                  |.:||          
  Fly   420 SS-------STCEPHG----------------------------------EQQLL---------- 433

  Fly   644 TSSVSAGITGGPAGAAPATVGSTLSPHSAHNQGSSLTVQSDGSGYLAAPGTPCPGRRKLSISKTA 708
                       |||..    |.:..|...|:.|.    :||.. .....|:...|..::.:::..
  Fly   434 -----------PAGGD----GGSCQPGGGHSGGG----KSDAE-ISTESGSDPKGCIQVCVTQAD 478

  Fly   709 SVVTWDSSRHRRRGSSFGGVRTSLLLTPTKTAT--TSNSSTPLRRSATLRSHQNMNYQGAGECGG 771
            .                   :|||.|||.:::|  .:.|.|||::..:          |..:   
  Fly   479 E-------------------QTSLKLTPPQSSTGVAAVSVTPLQKKTS----------GVNQ--- 511

  Fly   772 KTRTTTSSPCMLQRQQTVRSHHSRNSSVISRNSSRHGRIIRLEQKATKVLGVVFFTFVILWSPFF 836
                      .::.:|.:.                    :..|::|.:.||::...|||.|.|||
  Fly   512 ----------FIEEKQKIS--------------------LSKERRAARTLGIIMGVFVICWLPFF 546

  Fly   837 VLNLLPTVCAEC--EERISHWVFDVVTWLGYASSMVNPIFYTIFNKVFRQAFKKVL 890
            ::.::...|..|  ..:..::    :|||||.:|.:||:.|||||..:|:|||::|
  Fly   547 LMYVILPFCQTCCPTNKFKNF----ITWLGYINSGLNPVIYTIFNLDYRRAFKRLL 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT2BNP_001262373.1 7tm_1 90..>262 CDD:278431 62/176 (35%)
7tm_4 90..>238 CDD:304433 55/152 (36%)
Oct-TyrRNP_001163494.1 Zinc_peptidase_like <113..244 CDD:301362 55/149 (37%)
7tm_1 126..>293 CDD:278431 62/171 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460649
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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