DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT2B and mAChR-A

DIOPT Version :9

Sequence 1:NP_001262373.1 Gene:5-HT2B / 41017 FlyBaseID:FBgn0261929 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster


Alignment Length:946 Identity:200/946 - (21%)
Similarity:336/946 - (35%) Gaps:304/946 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 QRTTANATSRHNQLHVARWNATGNATISATFEDVPFDANNYWALLALVLVLG---------TAAG 90
            :..|:.|.|.....:...:....|.||.       |:.......||.::|:|         |.||
  Fly    64 ENLTSTAASGLYDPYSGMYGNQTNGTIG-------FETKGPRYSLASMVVMGFVAAILSTVTVAG 121

  Fly    91 NILVCLAIAWERRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVKGYFPLGSEHCLTWICLDVL 155
            |::|.::...:::||.::||||.||||.|..:..:.|||..:|.:.||:|||...|.||:.||.|
  Fly   122 NVMVMISFKIDKQLQTISNYFLFSLAIADFAIGAISMPLFAVTTILGYWPLGPIVCDTWLALDYL 186

  Fly   156 FCTASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVFVWLLSIAMSLPLSLMYSKNHASVL 220
            ...||:::|..||.|||.|:..|:.:...:|..|..:.|...|.:|:.:..|  .:||..:    
  Fly   187 ASNASVLNLLIISFDRYFSVTRPLTYRAKRTTNRAAVMIGAAWGISLLLWPP--WIYSWPY---- 245

  Fly   221 VNGTCQIP-DPVY----------KLVGSIVCFYIPLGVMLLTYCLTVRLLARQRQNLGGGQQTAA 274
            :.|...:| |..|          ....::..||.|:.:|...|....|...:::::|        
  Fly   246 IEGKRTVPKDECYIQFIETNQYITFGTALAAFYFPVTIMCFLYWRIWRETKKRQKDL-------- 302

  Fly   275 ATPGWASGWLGQAPALERRCTWRRLLKPGPGNASSVLHAHSANSTDTDLSTLDNHELWLPDSSIK 339
                         |.|:            .|...|     |..|..:|.:|:.||          
  Fly   303 -------------PNLQ------------AGKKDS-----SKRSNSSDENTVVNH---------- 327

  Fly   340 EPTPTTMTALHQFGAEMLKLSRGLESVASSSTTGSPTKSEFSLSNHLQLQYPSSPQRYAATHQ-Q 403
              ....:.|..|.|             .:...|....:||.|         |.:...|..... .
  Fly   328 --ASGGLLAFAQVG-------------GNDHDTWRRPRSESS---------PDAESVYMTNMVID 368

  Fly   404 SHHHNHQQHPAGVYHQQASPKGRHGTTVLGLSTTTLGIERESTRNSLASSRMGGEQSDGTLSQLS 468
            |.:|       |::.:::|.|   .|..:..|.|..|..:|.   .:|....|.|.||..     
  Fly   369 SGYH-------GMHSRKSSIK---STNTIKKSYTCFGSIKEW---CIAWWHSGREDSDDF----- 415

  Fly   469 QRLRAYKKRRRASSAVPGREKRAGHEDADEDVETPTSTLRRHKRHNSLPKNALYPRHTTVQESLD 533
                ||::                .|.:|....||.:.        ..|..:...|.|::....|
  Fly   416 ----AYEQ----------------EEPSDLGYATPVTI--------ETPLQSSVSRCTSMNVMRD 452

  Fly   534 DDDDEEEESAQQKDQQTKSKICHSDTELDPPQKAKQCHIAGQNHQSDYLQLPSVCTCPYFGDRPL 598
            :                 ..:..|.:.:.||.                :.|..|...|.  .|| 
  Fly   453 N-----------------YSMGGSVSGVRPPS----------------ILLSDVSPTPL--PRP- 481

  Fly   599 QNCVKSAEVKIISSAFRVTTTTTA-VSSSPSEMELLMCSSGNKKSLTSSVSAGITGGPAGAAPAT 662
                ..|.:..:.....||.:||| |::|         .:||                       
  Fly   482 ----PLASISQLQEMSAVTASTTANVNTS---------GNGN----------------------- 510

  Fly   663 VGSTLSPHSAHNQGSSLTVQSDGSGYLAAPGTPCPGRRKLSISKTASVVTWDSSRHRRRGSSFGG 727
             |:..:.::|.:.|:. .|..:|:|..:..|....|......|:|..|:    :|...|..|...
  Fly   511 -GAINNNNNASHNGNG-AVNGNGAGNGSGIGLGTTGNATHRDSRTLPVI----NRINSRSVSQDS 569

  Fly   728 VRTSLLLTPTKTATTSNSST-----PLRRSATLRSHQNMNYQGAGECG---------GKTRTTTS 778
            |.|.|:..|:..| :||::.     |   .|...:..:::.|  |:|.         |.|.|..:
  Fly   570 VYTILIRLPSDGA-SSNAANGGGGGP---GAGAAASASLSMQ--GDCAPSIKMIHEDGPTTTAAA 628

  Fly   779 SPCM-------------------LQRQQTVRSHHSR--NSSVI---------------------- 800
            :|..                   |.|:.:...|.:|  |:.||                      
  Fly   629 APLASAAATRRPLPSRDSEFSLPLGRRMSHAQHDARLLNAKVIPKQLGKAGGGAAGGGVGGAHAL 693

  Fly   801 --SRNSS---RHGRIIRLEQKATKVLGVVFFTFVILWSPFFVLNLLP--TVCAECEERISHWVFD 858
              :||::   :..:..|.|.||.|.|..:..:|:|.|:|:.:|.|:.  |.|::|   |...::|
  Fly   694 MNARNAAKKKKKSQEKRQESKAAKTLSAILLSFIITWTPYNILVLIKPLTTCSDC---IPTELWD 755

  Fly   859 VVTWLGYASSMVNPIFYTIFNKVFRQAFKKVLLCRY 894
            ....|.|.:|.:||:.|.:.|..||:.:.::|.|::
  Fly   756 FFYALCYINSTINPMCYALCNATFRRTYVRILTCKW 791

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT2BNP_001262373.1 7tm_1 90..>262 CDD:278431 57/182 (31%)
7tm_4 90..>238 CDD:304433 51/158 (32%)
mAChR-ANP_523844.2 7tm_4 117..>241 CDD:304433 47/125 (38%)
7tm_1 121..>314 CDD:278431 62/236 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460683
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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