DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT2B and Dop2R

DIOPT Version :9

Sequence 1:NP_001262373.1 Gene:5-HT2B / 41017 FlyBaseID:FBgn0261929 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_001014758.2 Gene:Dop2R / 33007 FlyBaseID:FBgn0053517 Length:905 Species:Drosophila melanogaster


Alignment Length:856 Identity:198/856 - (23%)
Similarity:303/856 - (35%) Gaps:323/856 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 RWNATGNATISATFE--DVPFDANNYWALLALVLVLGTAAGNILVCLAIAWERRLQNVTNYFLMS 114
            |.|.| |.|::.|..  ::....:|||||:.::..:.|..|||||.|::..||.||.|||||::|
  Fly   353 RLNCT-NETLNLTDSCGELRVVDHNYWALILILFPILTLFGNILVILSVCRERSLQTVTNYFIVS 416

  Fly   115 LAITDLMVAVLVMPLGILTLVKGYFPLGSEHCLTWICLDVLFCTASIMHLCTISVDRYLSLRYPM 179
            |||.||:|||:|||..:..||.|.:.|....|..:|.:||:..|:||.:|..||:|||:::..|:
  Fly   417 LAIADLLVAVVVMPFAVYFLVNGAWALPDVVCDFYIAMDVICSTSSIFNLVAISIDRYIAVTQPI 481

  Fly   180 RFGRNKTRRRVTLKIVFVWLLSIAMSLPLSLMYSKNHASVLVNGTCQIPDPVYKLVGSIVCFYIP 244
            ::.::|..|||.|.|:.||.:|.|:..|:.|  ..|:........|...:..:.|..|:..||||
  Fly   482 KYAKHKNSRRVCLTILLVWAISAAIGSPIVL--GLNNTPNREPDVCAFYNADFILYSSLSSFYIP 544

  Fly   245 LGVMLLTYCLTVRLLARQRQNLGGGQQTAAATPGWASGWLGQAPALERRCTWRRLLKPGPGNASS 309
            ..:|:..|....:.| |.|..    :|.||..|                                
  Fly   545 CIIMVFLYWNIFKAL-RSRAR----KQRAARKP-------------------------------- 572

  Fly   310 VLHAHSANSTDTDLSTLDNHELWLPDSSIKEPTPTTMTALHQFGAEMLKLSRGLESVASSSTTGS 374
                               |...|...|:                        :|::|.:     
  Fly   573 -------------------HLSELTGGSV------------------------IENIAQT----- 589

  Fly   375 PTKSEFSLSNHLQLQYPSSPQRYAATHQQSHHHNHQQHPAGVYHQQASPKGRHGTTVLGLSTTTL 439
                                :|.|.|                    |....||.:.:|       
  Fly   590 --------------------RRLAET--------------------ALDSSRHASRIL------- 607

  Fly   440 GIERESTRNSLASSRMGGEQSDGTLSQLSQRLRAYKKRRRASSAVPGREKRAGHEDADEDVETPT 504
              ..|:..|:.:.|                                       :|:.||      
  Fly   608 --PDEAATNTASGS---------------------------------------NEEEDE------ 625

  Fly   505 STLRRHKRHNSLPKNALYPRHTTVQESLDDDDDEEEESAQQKDQQTKSKICHSDTELDPPQKAKQ 569
                          ||:.|          |.||                                
  Fly   626 --------------NAISP----------DIDD-------------------------------- 634

  Fly   570 CHIAGQNHQSDYLQLPSVCTCPYFGDRPLQNCVKSAEVKIISSAFRVTTTTTAVSSSPSEMELLM 634
            ||:...:..::::               |...|:.....:::   ::||....|.:.|:...   
  Fly   635 CHVIVNDKSTEFM---------------LATVVEETGNSVVA---QITTQPQLVVADPNGNH--- 678

  Fly   635 CSSGNKKSLTSSVSAGITGGPAGAAPATVGSTLSPHSAHNQGSSLTVQSDGSGYLAAPGTPCPGR 699
             .||...|....|.||:  .||.|:.||               |...:|.||    .|.:|.|..
  Fly   679 -DSGYAASNVDDVLAGV--APASASAAT---------------SAAPRSSGS----PPDSPLPSG 721

  Fly   700 RKLSISKTASV--VTWDSSRHRRRGS----SFGGVRTSLLLTPTKTAT--TSNSSTPLRRSATLR 756
            ..|..|..:|.  .|.|.|  .:||.    |.|...:|:.:.|.....  ...:.|..|..:|| 
  Fly   722 ATLQRSSVSSQRRPTGDDS--PKRGEPALRSVGVDNSSVAMKPLSFVRYGVQEAMTLARNDSTL- 783

  Fly   757 SHQNMNYQGAGECGGKTRTTTSSPCMLQRQQTVRSHHSRNSSVISRNSSRHGR---IIRLEQKAT 818
                           .|.:.|||     |:....|..||.:......:|:..|   ..:.|:|||
  Fly   784 ---------------STTSKTSS-----RKDKKNSQASRFTIYKVHKASKKKREKSSAKKERKAT 828

  Fly   819 KVLGVVFFTFVILWSPFFVLNLLPTVCA----ECEERISHWVFDVVTWLGYASSMVNPIFYTIFN 879
            |.|.:|...|:..|.|||..|::..:||    :|...::.::  :.|||||.:|.|||:.|||||
  Fly   829 KTLAIVLGVFLFCWLPFFSCNIMDAMCAKFKKDCRPGLTAYM--MTTWLGYINSFVNPVIYTIFN 891

  Fly   880 KVFRQAFKKVL 890
            ..||:||||::
  Fly   892 PEFRKAFKKIM 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT2BNP_001262373.1 7tm_1 90..>262 CDD:278431 68/171 (40%)
7tm_4 90..>238 CDD:304433 60/147 (41%)
Dop2RNP_001014758.2 7tmA_D2-like_dopamine_R 376..>565 CDD:320181 76/195 (39%)
TM helix 1 377..403 CDD:320181 11/25 (44%)
TM helix 2 410..436 CDD:320181 16/25 (64%)
TM helix 3 448..478 CDD:320181 13/29 (45%)
TM helix 4 490..513 CDD:320181 11/24 (46%)
TM helix 5 529..558 CDD:320181 8/28 (29%)
7tm_GPCRs <822..898 CDD:333717 32/77 (42%)
TM helix 6 825..850 CDD:320095 11/24 (46%)
TM helix 7 866..891 CDD:320095 12/26 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437686
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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