DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT2B and ADRA1D

DIOPT Version :10

Sequence 1:NP_001262373.1 Gene:5-HT2B / 41017 FlyBaseID:FBgn0261929 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_000669.1 Gene:ADRA1D / 146 HGNCID:280 Length:572 Species:Homo sapiens


Alignment Length:221 Identity:68/221 - (30%)
Similarity:112/221 - (50%) Gaps:38/221 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 ATGNATISATFEDVPFDANNYWALLALVLVLGTAAGNILVCLAIAWERRLQNVTNYFLMSLAITD 119
            |.|...:||....|        .:.....:|...|||:||.|::|..|.||.|||||:::||:.|
Human    86 AVGGLVVSAQGVGV--------GVFLAAFILMAVAGNLLVILSVACNRHLQTVTNYFIVNLAVAD 142

  Fly   120 LMVAVLVMPLGILTLVKGYFPLGSEHCLTWICLDVLFCTASIMHLCTISVDRYLSLRYPMRFGRN 184
            |:::..|:|......|.|::..|...|..|..:|||.|||||:.|||||||||:.:|:.:::...
Human   143 LLLSATVLPFSATMEVLGFWAFGRAFCDVWAAVDVLCCTASILSLCTISVDRYVGVRHSLKYPAI 207

  Fly   185 KTRRRVTLKIVFVWLLSIAMSLPLSLMYSKNHASVLVNGTCQIPDPV--------------YKLV 235
            .|.|:....:..:|::::.:|:...|.:.               :||              |.:.
Human   208 MTERKAAAILALLWVVALVVSVGPLLGWK---------------EPVPPDERFCGITEEAGYAVF 257

  Fly   236 GSIVCFYIPLGVMLLTYCLTVRLLAR 261
            .|:..||:|:.|:::.|| .|.::||
Human   258 SSVCSFYLPMAVIVVMYC-RVYVVAR 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT2BNP_001262373.1 7tmA_5-HT2_insect-like 74..>267 CDD:320433 63/202 (31%)
TM helix 1 75..101 CDD:320433 8/25 (32%)
TM helix 2 108..134 CDD:320433 10/25 (40%)
TM helix 3 146..176 CDD:320433 19/29 (66%)
TM helix 4 188..211 CDD:320433 3/22 (14%)
TM helix 5 229..258 CDD:320433 11/42 (26%)
7tm_GPCRs <799..893 CDD:475119
TM helix 6 818..840 CDD:410628
TM helix 7 854..879 CDD:410628
ADRA1DNP_000669.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..77
7tmA_alpha1D_AR 97..413 CDD:320450 64/210 (30%)
TM helix 1 98..124 CDD:320450 9/33 (27%)
TM helix 2 131..157 CDD:320450 10/25 (40%)
TM helix 3 169..199 CDD:320450 19/29 (66%)
TM helix 4 211..234 CDD:320450 3/22 (14%)
TM helix 5 251..280 CDD:320450 9/29 (31%)
TM helix 6 341..371 CDD:320450
TM helix 7 381..406 CDD:320450
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..488
Blue background indicates that the domain is not in the aligned region.

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