DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 5-HT2B and Dop1R1

DIOPT Version :10

Sequence 1:NP_001262373.1 Gene:5-HT2B / 41017 FlyBaseID:FBgn0261929 Length:947 Species:Drosophila melanogaster
Sequence 2:XP_061506303.1 Gene:Dop1R1 / 1275919 VectorBaseID:AGAMI1_010805 Length:445 Species:Anopheles gambiae


Alignment Length:316 Identity:106/316 - (33%)
Similarity:160/316 - (50%) Gaps:51/316 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 TTANATSRHNQLHVARWNATGNATISAT-----------------FEDV----PFDANNYWALLA 80
            |..:||:..|...|.:.:.:|:.:.|.|                 .:||    |...:.....|:
Mosquito    19 TVVSATTIGNLTSVNQTDGSGDGSGSGTGASSGTGIPGGPGEDTDDDDVDVLSPLSMSFLGVFLS 83

  Fly    81 LVLVLGTAAGNILVCLAIAWERRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVKGYFPLGSEH 145
            :|:.| :.|||||||:||..||.|:.:.|.||.||||.||.||.|||....:..:.||:..|::.
Mosquito    84 IVIFL-SVAGNILVCIAIYTERSLRRIGNLFLASLAIADLFVASLVMTFAGVNDLLGYWIFGAQF 147

  Fly   146 CLTWICLDVLFCTASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVFVWLLSIAMS-LPLS 209
            |.||:..||:..||||::||.||:|||:.::.|:|:||..|||.....|..:|||:..:| :|:|
Mosquito   148 CDTWVAFDVMCSTASILNLCAISLDRYIHIKDPLRYGRWVTRRVAIGTIAVIWLLAALVSFVPIS 212

  Fly   210 L-----MYSKNHASVLVNG----TCQIP-DPVYKLVGSIVCFYIPLGVMLLTYCLTVRLLARQRQ 264
            |     ...|...|:.:||    ||.:. .|.|.:|.|.:.||:|..||:..||   ||....::
Mosquito   213 LDLHRDKRDKTDTSLKINGIKYETCALDLTPTYAVVSSCISFYVPCIVMIGIYC---RLYCYAQK 274

  Fly   265 NLGGGQQTAAATPGWASGWLGQAPALERRCTWRRLLKPGPGNASSVLH--AHSANS 318
            ::...:  |...||..|         |:|  :|.:.:|........|.  ||:|:|
Mosquito   275 HVKSIR--AVTRPGEIS---------EKR--YRSIRRPKSSKNKLKLRQLAHTASS 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT2BNP_001262373.1 7tmA_5-HT2_insect-like 74..>267 CDD:320433 82/203 (40%)
TM helix 1 75..101 CDD:320433 12/25 (48%)
TM helix 2 108..134 CDD:320433 14/25 (56%)
TM helix 3 146..176 CDD:320433 16/29 (55%)
TM helix 4 188..211 CDD:320433 9/28 (32%)
TM helix 5 229..258 CDD:320433 11/28 (39%)
7tm_GPCRs <799..893 CDD:475119
TM helix 6 818..840 CDD:410628
TM helix 7 854..879 CDD:410628
Dop1R1XP_061506303.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.