DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT2B and LOC1269968

DIOPT Version :10

Sequence 1:NP_001262373.1 Gene:5-HT2B / 41017 FlyBaseID:FBgn0261929 Length:947 Species:Drosophila melanogaster
Sequence 2:XP_061499186.1 Gene:LOC1269968 / 1269968 VectorBaseID:AGAMI1_010361 Length:587 Species:Anopheles gambiae


Alignment Length:924 Identity:203/924 - (21%)
Similarity:313/924 - (33%) Gaps:372/924 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DVYASLGAYNDSGG-DDWSSSEHLVLWEE---DETQRTTANATSRHNQLHVARWNATGNATISAT 64
            |||..:  :.|||. |.:.|::...:..|   :|:....||.|.      :....|:.|.|....
Mosquito    23 DVYDYI--FIDSGSPDSYLSADVGSIGNETFFNESANAFANTTD------LGPVPASINGTADEP 79

  Fly    65 FEDVPFDANNYWALLALVL---VLGTAAGNILVCLAIAWERRLQNVTNYFLMSLAITDLMVAVLV 126
            ..||     ...|:.:|||   :|.|..||:.|..||..||.||||.||.:.|||:.||.||.||
Mosquito    80 LADV-----IVMAITSLVLGLMILVTVIGNVFVIAAIILERNLQNVANYLVASLAVADLFVACLV 139

  Fly   127 MPLGILTLVKGYFPLGSEHCLTWICLDVLFCTASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVT 191
            ||||.:..:...:.||.|.|..|...|||.|||||:||..|:.|||.::. .:.:..::|.|||.
Mosquito   140 MPLGAVYEISRGWILGPELCDIWTSCDVLCCTASILHLVAIATDRYWAVT-NIDYIHSRTSRRVF 203

  Fly   192 LKIVFVWLLSIAMSL-PLSLMYSKNHASVLVNGTCQIPDPV-YKLVGSIVCFYIPLGVMLLTYCL 254
            ..|..||..|:.:|| |........:...:....|.:...: |::..:...||:||.|:|:.|..
Mosquito   204 TMIFLVWFASVIVSLAPQFGWKDPEYLQRIEQQKCMVSQNIAYQVFATCCTFYVPLFVILVLYWK 268

  Fly   255 TVRLLARQRQNLGGGQQTAAATPGWASGWLGQAPALERRCTWRRLLKPGPGNASSVLHAHSANST 319
            .              .|||.                      ||:.:.||...::          
Mosquito   269 I--------------YQTAR----------------------RRIHRRGPKIPAT---------- 287

  Fly   320 DTDLSTLDNHELWLPDSSIKEPTPTTMTALHQFGAEMLKLSRGLESVASSSTTGSPTKSEFSLSN 384
                          |:||.:|.||                                 |.:..:..
Mosquito   288 --------------PNSSNQEETP---------------------------------KPKSKIRF 305

  Fly   385 HLQLQYPSSPQRYAATHQQSHHHNHQQHPAGVYHQQASPKGRHGTTVLGLSTTTLGIERESTRNS 449
            ||:.:: ::|.:.|.:.                              |||      :|..||   
Mosquito   306 HLKKKF-TNPTKSAVSS------------------------------LGL------VEGNST--- 330

  Fly   450 LASSRMGGEQSDGTLSQLSQRLRAYKKRRRASSAVPGREKRAGHEDADEDVETPTSTLRRHKRHN 514
                                                                             
Mosquito   331 ----------------------------------------------------------------- 330

  Fly   515 SLPKNALYPRHTTVQESLDDDDDEEEESAQQKDQQTKSKICHSDTELDPPQKAKQCHIAGQNHQS 579
                       .|| .:::|.:|....:|.:|..:|...   .|.....|        .|.|   
Mosquito   331 -----------NTV-NTVEDTEDSTANAADRKGLETTFS---GDEGNGTP--------LGNN--- 369

  Fly   580 DYLQLPSVCTCPYFGDRPLQNCVKSAEVKIISSAFRVTTTTTAVSSSPSEMELLMCSSGNKKSLT 644
               |:|:|                         ::.||....|.::.        ||..|..:  
Mosquito   370 ---QIPTV-------------------------SYEVTHQQLAQAAG--------CSESNNNN-- 396

  Fly   645 SSVSAGITGGPAGAAPATVGSTLSPHSAHNQGSSLTVQSDGSGYLAAPGTPCPGRRKLSISKTAS 709
               :.|.||.....:|:..|.||       .||:..||   :.:.::|..|              
Mosquito   397 ---NPGRTGSAGKTSPSGNGGTL-------PGSTYPVQ---AVHASSPLLP-------------- 434

  Fly   710 VVTWDSSRHRRRGSSFGGVRTSLLLTPTKTATTSNSSTPLRRSATLRSHQNMNYQGAGECGGKTR 774
                  .:|:...::....:.:  .|||...|..::.:.|              ||||  ||.|.
Mosquito   435 ------PQHQHHNAATAAKQPA--GTPTAHLTPGSAGSGL--------------QGAG--GGSTL 475

  Fly   775 TTTSSP----CMLQRQQTVRSHHSRNSSVISRNSSRHGRIIRLEQKATKVLGVVFFTFVILWSPF 835
            ...|:|    .:.:|::|:.:                    :.|:||.|.|.::...||:.|.||
Mosquito   476 NIASTPNPQAQVSKRKETLEA--------------------KRERKAAKTLAIITGAFVVCWLPF 520

  Fly   836 FVLNLLPTVCAECEERISHWVFDVVTWLGYASSMVNPIFYTIFNKVFRQAFKKVLLCRYSSTSAW 900
            |:..||..:|..|.  |:..|..:..||||.:|.:||:.||||:..||||||::|...:.|.:..
Mosquito   521 FLTALLLPLCESCS--INDTVASLFLWLGYFNSTLNPVIYTIFSPEFRQAFKRILFGTHRSANYR 583

  Fly   901 RPSRXQTPVKPGKL 914
            |          |||
Mosquito   584 R----------GKL 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT2BNP_001262373.1 7tmA_5-HT2_insect-like 74..>267 CDD:320433 71/197 (36%)
TM helix 1 75..101 CDD:320433 11/28 (39%)
TM helix 2 108..134 CDD:320433 15/25 (60%)
TM helix 3 146..176 CDD:320433 16/29 (55%)
TM helix 4 188..211 CDD:320433 10/23 (43%)
TM helix 5 229..258 CDD:320433 8/29 (28%)
7tm_GPCRs <799..893 CDD:475119 35/93 (38%)
TM helix 6 818..840 CDD:410628 8/21 (38%)
TM helix 7 854..879 CDD:410628 11/24 (46%)
LOC1269968XP_061499186.1 None

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