DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 5-HT2B and 5-HT2A

DIOPT Version :10

Sequence 1:NP_001262373.1 Gene:5-HT2B / 41017 FlyBaseID:FBgn0261929 Length:947 Species:Drosophila melanogaster
Sequence 2:XP_061500179.1 Gene:5-HT2A / 1269329 VectorBaseID:AGAMI1_010455 Length:825 Species:Anopheles gambiae


Alignment Length:899 Identity:207/899 - (23%)
Similarity:298/899 - (33%) Gaps:397/899 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 EHLVLWEEDETQR-----TTANATSRHNQLHVARWNAT--------GNATISATFEDVPFDANNY 75
            |.:..|...|.:.     |..|....|....:|.||.|        |..|....:|         
Mosquito   257 EPIQCWMNVELRNALVSPTWLNGAEHHAVAALAGWNQTQLLGELPAGGDTAPGRYE--------- 312

  Fly    76 WALLALVL-VLGTAAGNILVCLAIAWERRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVKGYF 139
            |:.|.::| :.....||||||||:|.:|:|||||||||:||||.||:|::.|||||.:....||:
Mosquito   313 WSFLFVILFIFAGGLGNILVCLAVALDRKLQNVTNYFLLSLAIADLLVSLFVMPLGAIPGFLGYW 377

  Fly   140 PLGSEHCLTWICLDVLFCTASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVFVWLLSIAM 204
            |.|...|..::..|||.|:|||:|:|.||:.|||.:|.|:....:.|:|...:||..||||::.:
Mosquito   378 PFGVTWCNIYVTCDVLACSASILHMCFISLGRYLGIRNPLGSRHHSTKRLTGIKIALVWLLAMLV 442

  Fly   205 SLPLSLMYSKNHASVLVN-GTCQIPDPVYKLVGSIVCFYIPLGVMLLTYCLTVRLLARQRQNLGG 268
            |..::::...|..:::.. ..|.|.:..:.:.||:|.||||:.:|::||.|||:||.::.:    
Mosquito   443 SSSITVLGMINQNNIMPGPNECVINNRAFFVFGSLVAFYIPMVMMVVTYALTVQLLRKKAR---- 503

  Fly   269 GQQTAAATPGWASGWLGQAPALERRCTWRRLLKPGPGNASSVLHAHSANSTDTDLSTLDNHELWL 333
                          :|.|.|..|   .:|||   |...|||   .||.||               
Mosquito   504 --------------FLEQHPEGE---LFRRL---GGRLASS---KHSNNS--------------- 530

  Fly   334 PDSSIKEPTPTTMTALHQFGAEMLKLSRGLESVASSSTTGSPTKSEFSLSNHLQLQYPSSPQRYA 398
                                          :|..||::..:....:|:::|:.|..|        
Mosquito   531 ------------------------------QSDGSSTSNKAVEMRKFTVNNNKQPAY-------- 557

  Fly   399 ATHQQSHHHNHQQHPAGVYHQQASPKGRHGTTVLGLSTTTLGIERESTRNSLASSRMGGEQSDGT 463
                                      |:|.:               |..:||.|...|       
Mosquito   558 --------------------------GQHDS---------------SPPSSLPSVAAG------- 574

  Fly   464 LSQLSQRLRAYKKRRRASSAVPGREKRAGHEDADEDVETPTSTLRRHKRHNSLPKNALYPRHTTV 528
                                                             |::||           
Mosquito   575 -------------------------------------------------HSALP----------- 579

  Fly   529 QESLDDDDDEEEESAQQKDQQTKSKICHSDTELDPPQKAKQCHIAGQNHQSDYLQLPSVCTCPYF 593
                                                                             
Mosquito   580 ----------------------------------------------------------------- 579

  Fly   594 GDRPLQNCVKSAEVKIISSAFRVTTTTTAVSSSPSEMELLMCSSGNKKSLTSSVSAGITGGPAGA 658
                                :|...||.......|.|              ||:.          
Mosquito   580 --------------------WRWHGTTAGTGKMDSRM--------------SSIK---------- 600

  Fly   659 APATVGSTLSPHSAHNQGSSLTVQSDGSGYLAAPGTPCPGRRKLSISKTASVVTWDSSRHRRRGS 723
                 ||...||..::.|.:.|:....|..:...||..|                ||.....|..
Mosquito   601 -----GSMSHPHLGYSNGGNRTMAGKRSRTVCDQGTQTP----------------DSIERETRRQ 644

  Fly   724 SFGGVRTSLLLTPTKTATTSNSSTPLRRSATLRSHQNMNYQGAGECGGKTRTTTSSPCMLQRQQT 788
            .|...|..|...||...                   |.|.:   ..|.|.||..|:         
Mosquito   645 KFCSFRIHLNSVPTPAI-------------------NFNLK---FLGSKKRTNLSA--------- 678

  Fly   789 VRSHHSRNSSVISRNSSRHGRIIRLEQKATKVLGVVFFTFVILWSPFFVLNLLPTVCAECEERIS 853
                                ..:..|||||||||:||||||..|:|||:||::  ..|..|.::.
Mosquito   679 --------------------NAVATEQKATKVLGLVFFTFVFCWAPFFILNII--FAAWPEAKVP 721

  Fly   854 HWVFDVVTWLGYASSMVNPIFYTIFNKVFRQAFKKVLLCRYSSTSAWRPSRXQT 907
            ..:..:..||||.||.:|||.||||||.||.||.::|.||...:.  ||.|.::
Mosquito   722 ERIVSICLWLGYVSSTINPIIYTIFNKTFRAAFIRLLRCRCERSG--RPPRYRS 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT2BNP_001262373.1 7tmA_5-HT2_insect-like 74..>267 CDD:320433 82/194 (42%)
TM helix 1 75..101 CDD:320433 12/26 (46%)
TM helix 2 108..134 CDD:320433 17/25 (68%)
TM helix 3 146..176 CDD:320433 15/29 (52%)
TM helix 4 188..211 CDD:320433 8/22 (36%)
TM helix 5 229..258 CDD:320433 13/28 (46%)
7tm_GPCRs <799..893 CDD:475119 43/93 (46%)
TM helix 6 818..840 CDD:410628 16/21 (76%)
TM helix 7 854..879 CDD:410628 12/24 (50%)
5-HT2AXP_061500179.1 None

Return to query results.
Submit another query.