DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT2B and Adrb2

DIOPT Version :10

Sequence 1:NP_001262373.1 Gene:5-HT2B / 41017 FlyBaseID:FBgn0261929 Length:947 Species:Drosophila melanogaster
Sequence 2:NP_031446.2 Gene:Adrb2 / 11555 MGIID:87938 Length:418 Species:Mus musculus


Alignment Length:211 Identity:74/211 - (35%)
Similarity:113/211 - (53%) Gaps:11/211 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 DVPFDANNYW----ALLALVLVLGTAAGNILVCLAIAWERRLQNVTNYFLMSLAITDLMVAVLVM 127
            ||..:.:..|    |:|..|:||....||:||..|||...|||.|||||::|||..||::.:.|:
Mouse    23 DVTQERDEAWVVGMAILMSVIVLAIVFGNVLVITAIAKFERLQTVTNYFIISLACADLVMGLAVV 87

  Fly   128 PLGILTLVKGYFPLGSEHCLTWICLDVLFCTASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVTL 192
            |.|...::...:..|:..|..|..:|||..||||..||.|:||||:::..|.::....|:.:..:
Mouse    88 PFGASHILMKMWNFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYVAITSPFKYQSLLTKNKARV 152

  Fly   193 KIVFVWLLS-IAMSLPLSL-MYSKNHASVL---VNGTC--QIPDPVYKLVGSIVCFYIPLGVMLL 250
            .|:.||::| :...||:.: .|...|...:   ...||  ...:..|.:..|||.||:||.||:.
Mouse   153 VILMVWIVSGLTSFLPIQMHWYRATHKKAIDCYTEETCCDFFTNQAYAIASSIVSFYVPLVVMVF 217

  Fly   251 TYCLTVRLLARQRQNL 266
            .|....::..||.|.:
Mouse   218 VYSRVFQVAKRQLQKI 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT2BNP_001262373.1 7tmA_5-HT2_insect-like 74..>267 CDD:320433 72/204 (35%)
TM helix 1 75..101 CDD:320433 13/29 (45%)
TM helix 2 108..134 CDD:320433 12/25 (48%)
TM helix 3 146..176 CDD:320433 16/29 (55%)
TM helix 4 188..211 CDD:320433 6/24 (25%)
TM helix 5 229..258 CDD:320433 11/28 (39%)
7tm_GPCRs <799..893 CDD:475119
TM helix 6 818..840 CDD:410628
TM helix 7 854..879 CDD:410628
Adrb2NP_031446.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 74/211 (35%)
7tmA_Beta2_AR 34..336 CDD:341355 71/200 (36%)
TM helix 1 35..61 CDD:341355 12/25 (48%)
TM helix 2 68..95 CDD:341355 12/26 (46%)
TM helix 3 106..136 CDD:341355 16/29 (55%)
TM helix 4 148..171 CDD:341355 6/22 (27%)
TM helix 5 196..228 CDD:341355 11/31 (35%)
TM helix 6 266..296 CDD:341355
TM helix 7 305..330 CDD:341355
PDZ-binding 415..418
Blue background indicates that the domain is not in the aligned region.

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