| Sequence 1: | NP_001262373.1 | Gene: | 5-HT2B / 41017 | FlyBaseID: | FBgn0261929 | Length: | 947 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_002933964.1 | Gene: | htr1e / 100380026 | XenbaseID: | XB-GENE-965113 | Length: | 362 | Species: | Xenopus tropicalis |
| Alignment Length: | 327 | Identity: | 89/327 - (27%) |
|---|---|---|---|
| Similarity: | 145/327 - (44%) | Gaps: | 71/327 - (21%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 79 LALVLVLGTAAGNILVCLAIAWERRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVKGYFPLGS 143
Fly 144 EHCLTWICLDVLFCTASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVFVWLLSIAMSLPL 208
Fly 209 SLMYSKNHASVLVNGTCQIPDP--VYKLVGSIVCFYIPLGVMLLTYCLTVRLLARQRQNLGGGQQ 271
Fly 272 TAAATPGWASGWLGQAPALERRCTWRRLLKPGPGNASSVLHAHSANSTDT----DLSTLDNHELW 332
Fly 333 LPDSSIKEPTPTTMTALHQFGAEMLKLSRGLESVASSSTTGSPTKSEFSLSNHLQLQYPSSPQRY 397
Fly 398 AA 399 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| 5-HT2B | NP_001262373.1 | 7tmA_5-HT2_insect-like | 74..>267 | CDD:320433 | 64/189 (34%) |
| TM helix 1 | 75..101 | CDD:320433 | 9/21 (43%) | ||
| TM helix 2 | 108..134 | CDD:320433 | 15/25 (60%) | ||
| TM helix 3 | 146..176 | CDD:320433 | 14/29 (48%) | ||
| TM helix 4 | 188..211 | CDD:320433 | 7/22 (32%) | ||
| TM helix 5 | 229..258 | CDD:320433 | 8/30 (27%) | ||
| 7tm_GPCRs | <799..893 | CDD:475119 | |||
| TM helix 6 | 818..840 | CDD:410628 | |||
| TM helix 7 | 854..879 | CDD:410628 | |||
| htr1e | XP_002933964.1 | 7tmA_5-HT1E | 20..352 | CDD:320457 | 89/327 (27%) |
| TM helix 1 | 21..47 | CDD:320457 | 9/21 (43%) | ||
| TM helix 2 | 54..80 | CDD:320457 | 15/25 (60%) | ||
| TM helix 3 | 92..122 | CDD:320457 | 14/29 (48%) | ||
| TM helix 4 | 134..156 | CDD:320457 | 7/23 (30%) | ||
| TM helix 5 | 175..204 | CDD:320457 | 8/32 (25%) | ||
| TM helix 6 | 281..311 | CDD:320457 | 4/7 (57%) | ||
| TM helix 7 | 320..345 | CDD:320457 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||