DRSC/TRiP Functional Genomics Resources

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Protein Alignment pch2 and SAP1

DIOPT Version :9

Sequence 1:NP_001287235.1 Gene:pch2 / 41013 FlyBaseID:FBgn0051453 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_010966.1 Gene:SAP1 / 856771 SGDID:S000000849 Length:897 Species:Saccharomyces cerevisiae


Alignment Length:418 Identity:102/418 - (24%)
Similarity:173/418 - (41%) Gaps:94/418 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 QTARKLPRNVSF----LPDL-TAEQTEHVHSVLLERDNGGVQPL--------KVAETKFRFHFYA 90
            :|.||:|.....    :.|: |.:.|||..|:..:|:...:...        ::.::.......|
Yeast   523 KTNRKIPAQKKIGSPKIEDVGTEDATEHATSLNEQREEPEIDKKVLREILEDEIIDSLQGVDRQA 587

  Fly    91 TRPEEGQLGLFSGEEGSDGIDSIVAASHALLPAAQFVGLWENLIYETGLKEKLLKFALSALMFSE 155
            .:....::.:...|...|.|..:.:|.::|..|..:..|..:|.  .||:|.:            
Yeast   588 AKQIFAEIVVHGDEVHWDDIAGLESAKYSLKEAVVYPFLRPDLF--RGLREPV------------ 638

  Fly   156 HRVDTNVIACNRLILLHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESG 220
                       |.:||.||||||||.|.:|:|.:         :::....|::.||.||:..||.
Yeast   639 -----------RGMLLFGPPGTGKTMLARAVATE---------SHSTFFSISASSLTSKYLGESE 683

  Fly   221 KLVAQLFNKIAELVSDPNNLVCVLIDEVESLAYARSAMSSNEPRDAMRVVNAVLTQLDSLKTC-- 283
            |||..|| .||:.:| |:   .:.:||::|:..:|:  :.||...:.|:.|..|.|..||.:.  
Yeast   684 KLVRALF-AIAKKLS-PS---IIFVDEIDSIMGSRN--NENENESSRRIKNEFLVQWSSLSSAAA 741

  Fly   284 ------------------PNVLILATSNLAQSIDLAFVDRADIRLFIGYPGISAIREIYKGMLAE 330
                              ..||:||.:||..|||.|...|...|.:|..|........:|.:|:.
Yeast   742 GSNKSNTNNSDTNGDEDDTRVLVLAATNLPWSIDEAARRRFVRRQYIPLPEDQTRHVQFKKLLSH 806

  Fly   331 LMSAGVLQREVLESEDAEEGLLTQLAERSVGLSGRTLRKL-------PLLAHAQYTSSTLFELDQ 388
                   |:..|...|.:|  |.::.|   |.||..:..|       ||.........|..|:.:
Yeast   807 -------QKHTLTESDFDE--LVKITE---GYSGSDITSLAKDAAMGPLRDLGDKLLETEREMIR 859

  Fly   389 KISLSDFLDAMLEALEQHLGEQRLLKLE 416
            .|.|.||.:::: .::..:.:..|:|.|
Yeast   860 PIGLVDFKNSLV-YIKPSVSQDGLVKYE 886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pch2NP_001287235.1 AAA 166..315 CDD:214640 55/168 (33%)
AAA 169..314 CDD:278434 54/164 (33%)
SAP1NP_010966.1 Herpes_BLLF1 <353..543 CDD:282904 5/19 (26%)
SpoVK <557..890 CDD:223540 92/384 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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