Protein Alignment pch2 and PEX1

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_012724.1
• Gene: PEX1 / 853636
• SGDID: S000001680
• Length: 1043
• Species: Saccharomyces cerevisiae
• Alignment Length: 268
• Identity: 69/268 - (25%)
• Similarity: 118/268 - (44%)
• Gaps: 50/268 - (18%)

  Fly   169 ILLHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAEL 233
            |||:|.||.|||.|..|:||:..:         :.:.:....:.:|:...|.:.:.:||.: |:.
Yeast   734 ILLYGYPGCGKTLLASAVAQQCGL---------NFISVKGPEILNKFIGASEQNIRELFER-AQS 788

  Fly   234 VSDPNNLVCVL-IDEVESLAYARSAMSSNEPRDAMRVVNAVLTQLDSLKTCPNVLILATSNLAQS 297
            |..     |:| .||.:|:|..|...|:..   ..||||.:|||:|..:....|.|||.::....
Yeast   789 VKP-----CILFFDEFDSIAPKRGHDSTGV---TDRVVNQLLTQMDGAEGLDGVYILAATSRPDL 845

  Fly   298 IDLAFV--DRADIRLFIGYPGISAIREIYKGMLAELMSAGVLQREVLESEDAEEGL--------- 351
            ||.|.:  .|.|..:....|             .|.....:|| .::.|:|.:.|.
Yeast   846 IDSALLRPGRLDKSVICNIP-------------TESERLDILQ-AIVNSKDKDTGQKKFALEKNA 896

  Fly   352 -LTQLAERSVGLSGRTLRKLPLLAHAQYTSSTLFELDQK--ISLSDFLDAMLEALEQH-LGEQRL 412
             |..:||::.|.||..|:.|...|:.:.....|...||.  :..:|.::..  ::.:| ..|:..
Yeast   897 DLKLIAEKTAGFSGADLQGLCYNAYLKSVHRWLSAADQSEVVPGNDNIEYF--SINEHGRREENR 959

  Fly   413 LKLESMEQ 420
            |:|:::.|
Yeast   960 LRLKTLLQ 967

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	44/145 (30%)
PEX1	NP_012724.1	PEX-1N	108..183	CDD:462729
		CDC48	<401..1023	CDD:273521	69/268 (26%)
		RecA-like_PEX1_r2	705..862	CDD:410934	44/145 (30%)