Protein Alignment pch2 and MSP1

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_011542.3
• Gene: MSP1 / 852915
• SGDID: S000003260
• Length: 362
• Species: Saccharomyces cerevisiae
• Alignment Length: 308
• Identity: 74/308 - (24%)
• Similarity: 129/308 - (41%)
• Gaps: 85/308 - (27%)

  Fly   109 GIDSIVAASHALLPAAQFVGLWENLIYETGLKEKLLKFALSALMFSEHRVDTNVIACNRLILLHG 173
            |:|.:::..|            |::||              .||..|...::.::.....:||:|
Yeast    95 GLDPLISDLH------------ESVIY--------------PLMMPEVYSNSPLLQAPSGVLLYG 133

  Fly   174 PPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLF---NKIAELVS 235
            |||.|||.|.||||::         :..:.:.|...|:..||:.||.|:|..:|   ||:...:
Yeast   134 PPGCGKTMLAKALAKE---------SGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCI- 188

  Fly   236 DPNNLVCVLIDEVESLAYARSAMSSNEPRDAMRVVNAVLTQLDSLKTCPNVLILATSNLAQSIDL 300
                   :.|||::|....||: :.:|....::.  ..:|..|.|.....|:|:..:|....||.
Yeast   189 -------IFIDEIDSFLRERSS-TDHEVTATLKA--EFMTLWDGLLNNGRVMIIGATNRINDIDD 243

  Fly   301 AFVDRADIRLFIGYPGISAIREIYKGMLAELMSAGVLQREVLESEDAEEGLLTQLAERSVGLSGR 365
            ||:.|...|..:..||..   :.|| :|:.|:....|        |.:|..|..:|:.:.|.||.
Yeast   244 AFLRRLPKRFLVSLPGSD---QRYK-ILSVLLKDTKL--------DEDEFDLQLIADNTKGFSGS 296

  Fly   366 TLRKLPLLAHAQYTSSTLFELDQKISLSDFLDAMLEALEQHLGEQRLL 413
            .|::|                        ..:|.|:|.::::.::|.|
Yeast   297 DLKEL------------------------CREAALDAAKEYIKQKRQL 320

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	51/199 (26%)
MSP1	NP_011542.3	RecA-like_ATAD1	92..255	CDD:410928	53/205 (26%)
		AAA_lid_3	280..319	CDD:465537	11/62 (18%)