Protein Alignment pch2 and AT1G50140

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_175433.2
• Gene: AT1G50140 / 841436
• AraportID: AT1G50140
• Length: 1003
• Species: Arabidopsis thaliana
• Alignment Length: 434
• Identity: 106/434 - (24%)
• Similarity: 173/434 - (39%)
• Gaps: 91/434 - (20%)

  Fly     8 DTVHVEVCLRGNDLRSNAIRNNVETALKAYFQTARKLPRNVSFLPDLTAEQTEHVHSVLLERD-- 70
            ||:.:.....|.|.|....|:|:...|||       |..:.....||....|:   .|:|.:.
plant   580 DTLRLFKKQLGEDRRIVISRSNINELLKA-------LEEHELLCTDLYQVNTD---GVILTKQKA 634

  Fly    71 --------------------NGG-----VQPLKVAETKFR-FHFYATRPEEGQLGLFSGEEGSDG 109
                                .||     .:.|:::..:.| ....:.:|.:....:...|...:.
plant   635 EKAIGWAKNHYLASCPVPLVKGGRLSLPRESLEISIARLRKLEDNSLKPSQNLKNIAKDEYERNF 699

  Fly   110 IDSIVAASHALLPAAQFVGL-WENLIYETGLKEKLLKFALSALMFSEHRVDTNVIACNRLILLHG 173
            :.::||...        :|: :|::.....:|:.|.:..:..:...|.....|::...:.|||.|
plant   700 VSAVVAPGE--------IGVKFEDIGALEDVKKALNELVILPMRRPELFARGNLLRPCKGILLFG 756

  Fly   174 PPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAELVSDPN 238
            |||||||.|.||||.:         |..:.:.|...:|.||||.::.||...||:...:|..
plant   757 PPGTGKTLLAKALATE---------AGANFISITGSTLTSKWFGDAEKLTKALFSFATKLAP--- 809

  Fly   239 NLVCVLIDEVESLAYARSAMSSNEPRDAMRVVNAVLTQLDSL--KTCPNVLILATSNLAQSIDLA 301
              |.:.:||::||..||...|.:|....||  |..:...|.|  |....:|||..:|....:|.|
plant   810 --VIIFVDEIDSLLGARGGSSEHEATRRMR--NEFMAAWDGLRSKDSQRILILGATNRPFDLDDA 870

  Fly   302 FVDRADIRLFIGYPGISAIREIYKGMLAELMSAGVLQREVLESEDAEEGLLTQLAERSVGLSGRT 366
            .:.|...|:::..|......:|.|..|..         |.|||:...|    :||:.:.|.||..
plant   871 VIRRLPRRIYVDLPDAENRLKILKIFLTP---------ENLESDFQFE----KLAKETEGYSGSD 922

  Fly   367 LRKLPLLAHAQYTSSTLFELDQK------------ISLSDFLDA 398
            |:.| .:|.|......|.:.:||            :||.||:.:
plant   923 LKNL-CIAAAYRPVQELLQEEQKGARAEASPGLRSLSLDDFIQS 965

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	58/199 (29%)
AT1G50140	NP_175433.2	McrB	546..>770	CDD:441011	44/207 (21%)
		P-loop containing Nucleoside Triphosphate Hydrolases	715..881	CDD:476819	55/181 (30%)
		AAA_lid_3	905..941	CDD:465537	11/40 (28%)