Protein Alignment pch2 and AT1G02890

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_171788.3
• Gene: AT1G02890 / 839507
• AraportID: AT1G02890
• Length: 1246
• Species: Arabidopsis thaliana
• Alignment Length: 269
• Identity: 79/269 - (29%)
• Similarity: 121/269 - (44%)
• Gaps: 46/269 - (17%)

  Fly   127 VGLWENLIYETGLKEKLLKFALSALMFSEHRVDTNVIACNRLILLHGPPGTGKTSLCKALAQKLS 191
            :|..||      :|:.|.:..:..|...|......:....:.|||.||||||||.|.||:|.:
plant   946 IGALEN------VKDTLKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVATE-- 1002

  Fly   192 IRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLF---NKIAELVSDPNNLVCVLIDEVESLAY 253
                   |..:.:.|:..|:.||||.|..|.|..:|   :|||..|        :.:|||:|:..
plant  1003 -------AGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSV--------IFVDEVDSMLG 1052

  Fly   254 ARSAMSSNEPRDAMR-VVNAVLTQLDSLKT--CPNVLILATSNLAQSIDLAFVDRADIRLFIGYP 315
            .|.....:|   ||| :.|..:...|.|:|  ...||:||.:|....:|.|.:.|...||.:..|
plant  1053 RRENPGEHE---AMRKMKNEFMINWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLP 1114

  Fly   316 GISAIREIYKGMLAELMSAGVLQREVLESEDAEEGLLTQLAERSVGLSGRTLRKLPLLAHAQYTS 380
            . ||.|       ::::|..:.:.|:.|..|.|     .:|..:.|.||..|:.|.:.| |....
plant  1115 D-SANR-------SKILSVILAKEEMAEDVDLE-----AIANMTDGYSGSDLKNLCVTA-AHLPI 1165

  Fly   381 STLFELDQK 389
            ..:.|.::|
plant  1166 REILEKEKK 1174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	60/190 (32%)
AT1G02890	NP_171788.3	FHA	124..223	CDD:469597
		RecA-like_ATAD1	945..1111	CDD:410928	60/190 (32%)
		AAA_lid_3	1135..1175	CDD:465537	12/46 (26%)