Protein Alignment pch2 and PEX6

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_171799.2
• Gene: PEX6 / 839315
• AraportID: AT1G03000
• Length: 941
• Species: Arabidopsis thaliana
• Alignment Length: 284
• Identity: 75/284 - (26%)
• Similarity: 125/284 - (44%)
• Gaps: 76/284 - (26%)

  Fly   169 ILLHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAEL 233
            :||:||||||||.|.||:|.:.|:         :.:.:....|.:.:..||.|.|..:|.|...
plant   694 VLLYGPPGTGKTLLAKAVATECSL---------NFLSVKGPELINMYIGESEKNVRDIFEKARS- 748

  Fly   234 VSDPNNLVCVL-IDEVESLAYARSAMSSNEPRDAM-RVVNAVLTQLDSLK-TCPNVLILATSNLA 295
             :.|    ||: .||::|||.||.|  |.:....| |||:.:|.::|.|. :..::.|:..||..
plant   749 -ARP----CVIFFDELDSLAPARGA--SGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRP 806

  Fly   296 QSIDLAFV--DRADIRLFIGYPGISAIREIYKGMLAELMSAGVLQREVLESEDAEEGLLTQLAER 358
            ..||.|.:  .|.|..|::|....::.||       .::.|  |.|:...|||..   |..:|
plant   807 DLIDPALLRPGRFDKLLYVGVNADASYRE-------RVLKA--LTRKFKLSEDVS---LYSVA-- 857

  Fly   359 SVGLSGRTLRKLPLLAHAQYTSSTLFEL---------DQKISLSD-----------------FLD 397
                     :|.|    :.:|.:.::.|         .:|:|.||                 ::|
plant   858 ---------KKCP----STFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEYVD 909

  Fly   398 AMLEALEQHLGEQRLLKLESMEQL 421
             .::|::|......:.:|:..|.|
plant   910 -FIKAMDQLSPSLSITELKKYEML 932

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	50/147 (34%)
PEX6	NP_171799.2	CDC48	<380..937	CDD:273521	75/284 (26%)
		RecA-like_PEX6_r2	666..825	CDD:410935	50/147 (34%)