DRSC/TRiP Functional Genomics Resources

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Protein Alignment pch2 and KATNAL2

DIOPT Version :10

Sequence 1:NP_524282.4 Gene:pch2 / 41013 FlyBaseID:FBgn0051453 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001340828.1 Gene:KATNAL2 / 83473 HGNCID:25387 Length:564 Species:Homo sapiens


Alignment Length:449 Identity:109/449 - (24%)
Similarity:182/449 - (40%) Gaps:100/449 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SNAIRNNVETALKAYFQTARKLPRNVSFLPDL---------TAEQTEHVHSVLLERDNGG-VQPL 77
            |:...||:....:.  :|.|.:..:...||.:         ||.:|....|:..|..|.. |...
Human   120 SDTAENNLPQRSRG--KTRRMMNDSCQNLPKINQQRPRSKTTAGKTGDTKSLNKEHPNQEVVDNT 182

  Fly    78 KVAETKFRFHFYATR---------PEEGQLGLFSG--EEGSDGIDSIVA----------ASHALL 121
            ::....|..|....|         |..||:..|.|  .:...|..|.:|          :...|.
Human   183 RLESANFGLHISRIRKDSGEENAHPRRGQIIDFQGLLTDAIKGATSELALNTFDHNPDPSERLLK 247

  Fly   122 PAAQFVGL-----------------------WENLIYETGLKEKLLKFALSALMFSEHRVDTNVI 163
            |.:.|:|:                       |.::|.....|:.:.:..:..:.:.:  :.|.::
Human   248 PLSAFIGMNSEMRELAAVVSRDIYLHNPNIKWNDIIGLDAAKQLVKEAVVYPIRYPQ--LFTGIL 310

  Fly   164 ACNRLILLHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFN 228
            :..:.:||:||||||||.|.||:|.:..         |....|::.::.|||..:|.|||..|| 
Human   311 SPWKGLLLYGPPGTGKTLLAKAVATECK---------TTFFNISASTIVSKWRGDSEKLVRVLF- 365

  Fly   229 KIAELV--SDPNNLVCVLIDEVESLAYARSAMSSNEPRDAMRVVNAVLTQLDSLKTCPN-VLILA 290
               ||.  ..|:.   :.:||:||:...|...|..|...::|:...:|.|:|.|....: |.:||
Human   366 ---ELARYHAPST---IFLDELESVMSQRGTASGGEHEGSLRMKTELLVQMDGLARSEDLVFVLA 424

  Fly   291 TSNLAQSIDLAFVDRADIRLFIGYPGISAIREIYKGMLAELMSAGVLQREVLESEDAEEGLLTQL 355
            .|||...:|.|.:.|.:.|:.:..|.    ||..:.|:...:......|.:....:.|..:|:|.
Human   425 ASNLPWELDCAMLRRLEKRILVDLPS----REARQAMIYHWLPPVSKSRALELHTELEYSVLSQE 485

  Fly   356 AERSVGLSG------------RTLRKL-PLLAHAQYTSSTL--FELDQKISLSDFLDAM 399
            .|   |.||            |.:||: ..|.:.|..||.|  .:|| .::.:||||.:
Human   486 TE---GYSGSDIKLVCREAAMRPVRKIFDALENHQSESSDLPRIQLD-IVTTADFLDVL 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pch2NP_524282.4 RecA-like_Pch2-like 115..312 CDD:410916 59/232 (25%)
KATNAL2NP_001340828.1 LisH 51..81 CDD:128913
RPT1 212..548 CDD:440835 89/355 (25%)
RecA-like_VPS4-like 282..446 CDD:410917 53/181 (29%)
Blue background indicates that the domain is not in the aligned region.

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