Protein Alignment pch2 and AT4G28000

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_001328776.1
• Gene: AT4G28000 / 828913
• AraportID: AT4G28000
• Length: 832
• Species: Arabidopsis thaliana
• Alignment Length: 427
• Identity: 104/427 - (24%)
• Similarity: 171/427 - (40%)
• Gaps: 108/427 - (25%)

  Fly     1 MSFLSNSDTVHVEVCLRGNDLR---------------SNAIRNNVETALKAYFQTARKLPRNVSF 50
            :.|..|.:  |:...|..|||.               |:.|...|.:|: :|.....|.|...:.
plant   351 IQFQDNKN--HIAEVLAANDLECDDLGSICHADTMFLSSHIEEIVVSAI-SYHLMNNKEPEYKNG 412

  Fly    51 LPDLTAEQTEHVHSVLLERDNGGVQPLKVAETKFRFHFYATRPEEGQLGLFSGEEGS-------- 107
            ...:::....|..::|.|........||: :|..     .::.|||: |:...|..|
plant   413 RLVISSNSLSHGLNILQEGQGCFEDSLKL-DTNI-----DSKVEEGE-GITKSESKSETTVPENK 470

  Fly   108 -DGIDSIVAAS-----------HALLPAAQFVGLWENLI-------YETGL-----------KEK 142
             :...||.||.           |.:.|..:|    |..|       .|.|:           ||.
plant   471 NESDTSIPAAKNECPLPPKAPVHEVAPDNEF----EKRIRPEVIPANEIGVTFADIGSLDETKES 531

  Fly   143 LLKFALSALMFSEHRVDT---NVIACNRLILLHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLV 204
            |.:..:..|    .|.|.   .::...|.|||.||||||||.:.||:|.:         |....:
plant   532 LQELVMLPL----RRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIANE---------AGASFI 583

  Fly   205 EINSHSLFSKWFSESGKLVAQLFNKIAELVSDPNNLVCVLIDEVESLAYARSAMSSNEPRDAMR- 268
            .::..::.||||.|..|.|..||...|::     :...:.:|||:|:...|:.:..:|   |||
plant   584 NVSMSTITSKWFGEDEKNVRALFTLAAKV-----SPTIIFVDEVDSMLGQRTRVGEHE---AMRK 640

  Fly   269 VVNAVLTQLDSL--KTCPNVLILATSNLAQSIDLAFVDRADIRLFIGYPGISAIREIYKGMLAEL 331
            :.|..:|..|.|  .....:|:||.:|....:|.|.:.|.:.|:.:|.|.:.:..:|.:.:|:
plant   641 IKNEFMTHWDGLMSNAGDRILVLAATNRPFDLDEAIIRRFERRIMVGLPSVESREKILRTLLS-- 703

  Fly   332 MSAGVLQREVLESEDAEEGLLTQLAERSVGLSGRTLR 368
                   :|..|:.|.:|     ||:.:.|.||..|:
plant   704 -------KEKTENLDFQE-----LAQMTDGYSGSDLK 728

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	62/231 (27%)
AT4G28000	NP_001328776.1	RPT1	487..762	CDD:440835	74/281 (26%)