Protein Alignment pch2 and AT4G27680

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_194498.1
• Gene: AT4G27680 / 828882
• AraportID: AT4G27680
• Length: 398
• Species: Arabidopsis thaliana
• Alignment Length: 267
• Identity: 74/267 - (27%)
• Similarity: 115/267 - (43%)
• Gaps: 55/267 - (20%)

  Fly   139 LKEKLLKFALSALMFSEHRVDTNVIACNRLILLHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHL 203
            :|:.|.:..:..|...|......::...:.:||:||||||||.|.||:|::     .|:.    .
plant    92 IKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKE-----SGAV----F 147

  Fly   204 VEINSHSLFSKWFSESGKLVAQLFNKIAELVSDPNNLVCVLIDEVES-LAYARSAMSSNEPRDAM 267
            :.:...:|.||||.::.|||:.:|:...:|  .|   ..:.|||||| |...||.     ..:||
plant   148 INVRVSNLMSKWFGDAQKLVSAVFSLAYKL--QP---AIIFIDEVESFLGQRRST-----DHEAM 202

  Fly   268 RVVNAVLTQL-DSLKTCPN--VLILATSNLAQSIDLAFVDRADIRLFIGYPGISAIREIYKGMLA 329
            ..:......| |...|.|:  |::||.:|....:|.|.:.|......||.|......||.|
plant   203 ANMKTEFMALWDGFSTDPHARVMVLAATNRPSELDEAILRRLPQAFEIGIPDRRERAEILK---- 263

  Fly   330 ELMSAGVLQREVLESEDAEEGLLTQLAERSVGLSGRTLRKLPLLAHAQYTSSTLFELDQKIS--- 391
                 ..|:.|.:| .|.:...:.:|.|                   .||.|.:|||.:|.:
plant   264 -----VTLKGERVE-PDIDFDHIARLCE-------------------GYTGSDIFELCKKAAYFP 303

  Fly   392 LSDFLDA 398
            :.:.|||
plant   304 IREILDA 310

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	52/176 (30%)
AT4G27680	NP_194498.1	RecA-like_ATAD1	85..250	CDD:410928	52/176 (30%)
		AAA_lid_3	274..310	CDD:465537	11/54 (20%)