Protein Alignment pch2 and AT4G24860

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_194217.2
• Gene: AT4G24860 / 828589
• AraportID: AT4G24860
• Length: 1122
• Species: Arabidopsis thaliana
• Alignment Length: 259
• Identity: 71/259 - (27%)
• Similarity: 113/259 - (43%)
• Gaps: 63/259 - (24%)

  Fly   169 ILLHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAEL 233
            |||.||||||||.|.||:|::         |..:.:.|:..|:.||||.|..|.|..:|:..:::
plant   858 ILLFGPPGTGKTMLAKAVAKE---------ADANFINISMSSITSKWFGEGEKYVKAVFSLASKM 913

  Fly   234 VSDPNNLVCVLIDEVESLAYARSAMSSNEPRD---AMRVVNAVLTQLDSLKT--CPNVLILATSN 293
              .|:   .:.:|||:|:...|     ..||:   :.::.|..:...|.|.|  ...||:||.:|
plant   914 --SPS---VIFVDEVDSMLGRR-----EHPREHEASRKIKNEFMMHWDGLTTQERERVLVLAATN 968

  Fly   294 LAQSIDLAFVDRADIRLFIGYPGISAIREIYKGMLAELMSAGVLQREVLESEDAEEGL-LTQLAE 357
            ....:|.|.:.|...||.:|.|..|....|.|.:||:              ||....| :.::|.
plant   969 RPFDLDEAVIRRLPRRLMVGLPDTSNRAFILKVILAK--------------EDLSPDLDIGEIAS 1019

  Fly   358 RSVGLSGRTLRKLPLLAHAQYTSSTLFELDQK-----------------------ISLSDFLDA 398
            .:.|.||..|:.|.:.| |......:.|.:::                       :::.||.||
plant  1020 MTNGYSGSDLKNLCVTA-AHRPIKEILEKEKRERDAALAQGKVPPPLSGSSDLRALNVEDFRDA 1082

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	48/147 (33%)
AT4G24860	NP_194217.2	McrB	710..>878	CDD:441011	15/19 (79%)
		P-loop containing Nucleoside Triphosphate Hydrolases	821..987	CDD:476819	48/147 (33%)
		AAA_lid_3	1011..1047	CDD:465537	9/36 (25%)