Protein Alignment pch2 and AT4G24710

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_194202.4
• Gene: AT4G24710 / 828573
• AraportID: AT4G24710
• Length: 479
• Species: Arabidopsis thaliana
• Alignment Length: 446
• Identity: 190/446 - (42%)
• Similarity: 266/446 - (59%)
• Gaps: 69/446 - (15%)

  Fly     6 NSDTVHVEVCLRGNDLRSNAIRNNVETALKAYFQTARKLPRNVSFLPDLTAEQTEHVHSVLLERD 70
            |...|.|||||:.:   |.|...:|:.|::...:.     |::|:...|          ||:..|
plant    60 NKFLVSVEVCLKPS---STARLEDVQRAVERMLEN-----RSMSYADGL----------VLIPAD 106

  Fly    71 N----GGVQPLKVAETKFRFH------FYATRPEEGQLGLFSGEEG------SDGIDSIVAASHA 119
            :    ..||.:.:.:|:....      |:..:|......|.  |||      :||  ...:.:..
plant   107 DLFLVDNVQRICICDTEEWVKNNDVLLFWQVKPVVHTFQLI--EEGPCEDLCADG--QPASFNEW 167

  Fly   120 LLPAAQFVGLWENLIYETGLKEKLLKFALSALMFSEHRVDTNVIACNRLILLHGPPGTGKTSLCK 184
            :|||.:|.||||:||||:|||::||::|.|||:|::..|:.|:::.||:||||||||||||||||
plant   168 ILPAKEFDGLWESLIYESGLKQRLLRYAASALLFTQKGVNPNLVSWNRIILLHGPPGTGKTSLCK 232

  Fly   185 ALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAELVSDPNNLVCVLIDEVE 249
            |||||||||....|.:..|:|:|:||||||||||||||||:||.||.|:|.:..|||.|||||||
plant   233 ALAQKLSIRCNSRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEDGNLVFVLIDEVE 297

  Fly   250 SLAYAR-SAMSSNEPRDAMRVVNAVLTQLDSLKTCPNVLILATSNLAQSIDLAFVDRADIRLFIG 313
            |||.|| :|:|.:||.|::|||||:|||:|.||:.|||:||.|||:..:||:||||||||:.::|
plant   298 SLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSAPNVIILTTSNITTAIDVAFVDRADIKAYVG 362

  Fly   314 YPGISAIREIYKGMLAELMSAGV-----------------LQREVLESEDAEEGL-------LTQ 354
            .|.:....||.:..:.||:|.|:                 |:.::.|||..:...       |.:
plant   363 PPTLHVRYEILRSCVEELISKGIISSFQGCDGLSIPSFSSLKEKLSESEVHDTNTVPWFCKQLIE 427

  Fly   355 LAERSVGLSGRTLRKLPLLAHAQYTSSTLFELDQKISLSDFLDAMLEALEQHLGEQ 410
            .|:...|||||:|||||.||||.....  :..|.    |:||..|:|..::...||
plant   428 AAKGCEGLSGRSLRKLPFLAHAALADP--YSHDP----SNFLCTMIETAKREKSEQ 477

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	126/197 (64%)
AT4G24710	NP_194202.4	RecA-like_Pch2-like	163..361	CDD:410916	126/197 (64%)