Protein Alignment pch2 and AT4G02480

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_567238.2
• Gene: AT4G02480 / 827979
• AraportID: AT4G02480
• Length: 1265
• Species: Arabidopsis thaliana
• Alignment Length: 269
• Identity: 78/269 - (28%)
• Similarity: 118/269 - (43%)
• Gaps: 46/269 - (17%)

  Fly   127 VGLWENLIYETGLKEKLLKFALSALMFSEHRVDTNVIACNRLILLHGPPGTGKTSLCKALAQKLS 191
            :|..||      :||.|.:..:..|...|......:....:.|||.||||||||.|.||:|.:
plant   965 IGALEN------VKETLKELVMLPLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAKAVATE-- 1021

  Fly   192 IRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLF---NKIAELVSDPNNLVCVLIDEVESLAY 253
                   |..:.:.|:..|:.||||.|..|.|..:|   :|||..|        :.:|||:|:..
plant  1022 -------AGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSV--------IFVDEVDSMLG 1071

  Fly   254 ARSAMSSNEPRDAMR-VVNAVLTQLDSLKT--CPNVLILATSNLAQSIDLAFVDRADIRLFIGYP 315
            .|.....:|   ||| :.|..:...|.|:|  ...||:||.:|....:|.|.:.|...||.:..|
plant  1072 RRENPGEHE---AMRKMKNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIRRLPRRLMVNLP 1133

  Fly   316 GISAIREIYKGMLAELMSAGVLQREVLESEDAEEGLLTQLAERSVGLSGRTLRKLPLLAHAQYTS 380
            ..:...:|...:||        :.|:....|.|     .:|..:.|.||..|:.|.:.| |.:..
plant  1134 DATNRSKILSVILA--------KEEIAPDVDLE-----AIANMTDGYSGSDLKNLCVTA-AHFPI 1184

  Fly   381 STLFELDQK 389
            ..:.|.::|
plant  1185 REILEKEKK 1193

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	61/190 (32%)
AT4G02480	NP_567238.2	SH3_12	611..689	CDD:465661
		CDC48	<895..1234	CDD:273521	78/269 (29%)
		RecA-like_ATAD1	964..1130	CDD:410928	61/190 (32%)