Protein Alignment pch2 and CIP111

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_191228.1
• Gene: CIP111 / 824836
• AraportID: AT3G56690
• Length: 1022
• Species: Arabidopsis thaliana
• Alignment Length: 445
• Identity: 95/445 - (21%)
• Similarity: 166/445 - (37%)
• Gaps: 121/445 - (27%)

  Fly     1 MSFLSNSDTVHVEVCLRGNDLRSNAIRNNVETALKAYFQTARKLPRNVSFLPD------------ 53
            ||.:|:..:.....|:..:...|.|             |.:..|...||.:.|
plant   631 MSDISSDSSDSASSCITISATTSGA-------------QRSFSLDETVSLVADDIQNNGNSCSEQ 682

  Fly    54 LTAEQTEHVHSVLLERDNGGVQPLKVAETKFRFHFYATRPEEGQLGLFSGEEGSDGIDSIVAASH 118
            :..:|.||..||       |.:..:.|:||.       ||.                    |...
plant   683 MLRKQGEHTLSV-------GFEDFENAKTKI-------RPS--------------------AMRE 713

  Fly   119 ALLPAAQFVGLWENLIYETGLKEKLLKFALSALMFSEHRVDTNVIACNRL-------ILLHGPPG 176
            .:|...:.  .||::..:..:|.:|::    |:.:.:...|    |..|:       ||:.||||
plant   714 VILEVPKV--NWEDVGGQNEVKNQLME----AVEWPQKHQD----AFKRIGTRPPSGILMFGPPG 768

  Fly   177 TGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAELVSDPNNLV 241
            ..||.:.:|:|         |.|..:.:.:....|||||..||.|.|..||.|     :..|...
plant   769 CSKTLMARAVA---------SEAKLNFLAVKGPELFSKWVGESEKAVRSLFAK-----ARANAPS 819

  Fly   242 CVLIDEVESLAYARSAMSSNEPRDAM----RVVNAVLTQLDSLKTCPNVLILATSNLAQSIDLAF 302
            .:..||::|||..|     .:..|.:    ||::.:|.:||.|.....|.::|.:|....||.|.
plant   820 IIFFDEIDSLASIR-----GKENDGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDSAL 879

  Fly   303 V--DRADIRLFIGYPGISAIREIYKGMLAELMSAGVLQREVLESEDAEEGLLTQLAERSVGLSGR 365
            :  .|.|..|::|.|..:....|.|          :..|::..|.|.   .|.:||..:.|.:|.
plant   880 LRPGRFDRLLYVGPPNETDREAILK----------IHLRKIPCSSDI---CLKELASITKGYTGA 931

  Fly   366 TLRKLPLLAHAQYTSSTLFELDQKISLSDFLDAMLEALEQHLGEQRLLKLESMEQ 420
            .:..:       ...:.:..|::.:.:.:.....|:|....:....:|..:::.:
plant   932 DISLI-------CREAAIAALEESLEMEEISMRHLKAAISQIEPTEILSYKALSE 979

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	57/209 (27%)
CIP111	NP_191228.1	CDC48	<387..984	CDD:273521	95/445 (21%)